RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 TTLL8A6PVC2 850 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 HOXB5P09067 269 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 FCGR2AP12318 317 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 CD22P20273 847 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 EVI2BP34910 448 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 PSPHP78330 225 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF585AQ6P3V2 769 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 VASH1Q7L8A9 365 aaPredicted RBP13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 GRINAQ7Z429 371 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 ANKRD53Q8N9V6 530 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 GON7Q9BXV9 100 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 SIAEQ9HAT2 523 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 CAMK2AQ9UQM7 478 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 ADAMTSL1Q8N6G6 1762 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 MTCP1P56278 107 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 NKAIN1Q4KMZ8 207 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 C9orf50Q5SZB4 431 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 AKR1C8PQ5T2L2 129 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 SLC16A9Q7RTY1 509 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 OR6V1Q8N148 313 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 BCORP1Q8N888 145 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 OR1S1Q8NH92 325 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 SLC25A46Q96AG3 418 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 PCDHGA1Q9Y5H4 931 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 PRAMEF25A6NGN4 478 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 F8W036 122 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 PPM1DO15297 605 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 LINC01565O15544 149 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 EIF4E2O60573 245 aaKnown RBP13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 NSA2O95478 260 aaKnown RBP13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 F10P00742 488 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 MT-ATP6P00846 226 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 SRMP19623 302 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 MRPL19P49406 292 aaKnown RBP13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 BLOC1S1P78537 153 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 BTG2P78543 158 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 MFAP5Q13361 173 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 SLC9A3R2Q15599 337 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 NKG7Q16617 165 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 CA13Q8N1Q1 262 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 OR9K2Q8NGE7 335 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 PHYHIPQ92561 330 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF845Q96IR2 970 aaPredicted RBP13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 CMSS1Q9BQ75 279 aaKnown RBP13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF649Q9BS31 505 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 CMC2Q9NRP2 79 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 ADAM18Q9Y3Q7 739 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 PAPLNO95428 1278 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 TCRBP04435 133 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 HOXD12P35452 270 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 TGFBR1P36897 503 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 RRAS2P62070 204 aaPredicted RBP13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 SORDQ00796 357 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 GALEQ14376 348 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 RTL6Q6ICC9 239 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 OR56B1Q8NGI3 324 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 CPT1CQ8TCG5 803 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 HSD17B8Q92506 261 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 PHF7Q9BWX1 381 aaPredicted RBP13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 METTL9Q9H1A3 318 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 NTN4Q9HB63 628 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 ACOXLQ9NUZ1 547 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 NPFFR2Q9Y5X5 522 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 RP1L1Q8IWN7 2480 aaPredicted RBP13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 AGPAT2O15120 278 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 DPM1O60762 260 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 OR7C1O76099 320 aaPredicted RBP13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 GLYR1Q49A26 553 aaPredicted RBP13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 LILRA6Q6PI73 481 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 OR4K15Q8NH41 348 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 RAB3CQ96E17 227 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 LRRC46Q96FV0 321 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 SULT4A1Q9BR01 284 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 MRPS28Q9Y2Q9 187 aaKnown RBP13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 UGT2A1Q9Y4X1 527 aa13.1□□□□□ -0.31
PCDHB16-201ENST00000609684 CXorf51AA0A1B0GTR3 108 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 EIF1P41567 113 aaKnown RBP13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 VWA2Q5GFL6 755 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 BEX5Q5H9J7 111 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 LINC00299Q6ZSB3 139 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF546Q86UE3 836 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 PLPP7Q8NBV4 271 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 RHNO1Q9BSD3 238 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 SELENOIQ9C0D9 397 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 DNAJB11Q9UBS4 358 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 OLFM2O95897 454 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 CD46P15529 392 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 EIF2S3P41091 472 aaKnown RBP13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 ARF1P84077 181 aaKnown RBP13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 TEKQ02763 1124 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 DCXRQ7Z4W1 244 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 TMEM185AQ8NFB2 350 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 TXNDC15Q96J42 360 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 IGLV3-16A0A075B6K0 115 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 TRAPPC2LH3BP13 241 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 IGHEP01854 428 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 ATP1B1P05026 303 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 CD1EP15812 388 aa13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 HIST1H1CP16403 213 aaKnown RBP13.09□□□□□ -0.31
PCDHB16-201ENST00000609684 RUNX2Q13950 521 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms