RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 NPIPB13A6NJU9 1138 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 NPIPB4C9JG80 1138 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 MCIDASD6RGH6 385 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 ZNF587BE7ETH6 402 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 CDC42EP2O14613 210 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 CLOCKO15516 846 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 F13BP05160 661 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 EPXP11678 715 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 IGHV1-2P23083 117 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 FPR3P25089 353 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 MPGP29372 298 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 DNAJA1P31689 397 aaKnown RBP12.58□□□□□ -0.4
CTSA-211ENST00000606066 ERFP50548 548 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 BIDP55957 195 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 SNTB1Q13884 538 aaKnown RBP12.58□□□□□ -0.4
CTSA-211ENST00000606066 OR7E24Q6IFN5 339 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 HMBOX1Q6NT76 420 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 C1orf94Q6P1W5 598 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 NHLRC1Q6VVB1 395 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 SPNS3Q6ZMD2 512 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 BHLHA15Q7RTS1 189 aaPredicted RBP12.58□□□□□ -0.4
CTSA-211ENST00000606066 SSX8Q7RTT4 187 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 ZER1Q7Z7L7 766 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 MEX3DQ86XN8 651 aaKnown RBP12.58□□□□□ -0.4
CTSA-211ENST00000606066 OR4C15Q8NGM1 316 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 OR13C2Q8NGS9 318 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 OR6N1Q8NGY5 312 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 MOSPD2Q8NHP6 518 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 LINC01560Q8TB33 94 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 GNPDA2Q8TDQ7 276 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 UTP4Q969X6 686 aaKnown RBP12.58□□□□□ -0.4
CTSA-211ENST00000606066 SLC25A44Q96H78 314 aaPredicted RBP12.58□□□□□ -0.4
CTSA-211ENST00000606066 EMC6Q9BV81 110 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 ACTR6Q9GZN1 396 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 CRIM1Q9NZV1 1036 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 U3KQV3 271 aa12.58□□□□□ -0.4
CTSA-211ENST00000606066 UNC119BA6NIH7 251 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 CENPBD1B2RD01 187 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 PDLIM1O00151 329 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 UPK3AO75631 287 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 LYZL6O75951 148 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 CCKARP32238 428 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 RPL4P36578 427 aaKnown RBP12.57□□□□□ -0.4
CTSA-211ENST00000606066 ARHGDIAP52565 204 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 CTXN1P60606 82 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 CAMK2DQ13557 499 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 CCNIQ14094 377 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 ACKR1Q16570 336 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 MICAQ29983 383 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 CARD17Q5XLA6 110 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 ANKRD34AQ69YU3 496 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 P2RY8Q86VZ1 359 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 C20orf196Q8IYI0 205 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 TMEM123Q8N131 208 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 ZNF433Q8N7K0 673 aaPredicted RBP12.57□□□□□ -0.4
CTSA-211ENST00000606066 C1orf162Q8NEQ5 155 aaPredicted RBP12.57□□□□□ -0.4
CTSA-211ENST00000606066 HSD17B8Q92506 261 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 ZNF566Q969W8 418 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 SLCO4A1Q96BD0 722 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 S100PBPQ96BU1 408 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 C14orf79Q96F83 325 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 DUS3LQ96G46 650 aaKnown RBP12.57□□□□□ -0.4
CTSA-211ENST00000606066 WFIKKN1Q96NZ8 548 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 TXNIPQ9H3M7 391 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 ARMC1Q9NVT9 282 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 DNAJB9Q9UBS3 223 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 AP4S1Q9Y587 144 aa12.57□□□□□ -0.4
CTSA-211ENST00000606066 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
CTSA-211ENST00000606066 RPL36A-HNRNPH2H7BZ11 118 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 M0R3G1 203 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 KLF4O43474 513 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 PTP4A3O75365 173 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 DEAF1O75398 565 aaPredicted RBP12.56□□□□□ -0.4
CTSA-211ENST00000606066 E2F6O75461 281 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 NDUFB2O95178 105 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 GOSR1O95249 250 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 IGHG1P01857 330 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 FCGR1AP12314 374 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 NR2C1P13056 603 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 CSNK1A1P48729 337 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
CTSA-211ENST00000606066 ACTR3P61158 418 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 ROR2Q01974 943 aaKnown RBP12.56□□□□□ -0.4
CTSA-211ENST00000606066 TSPAN31Q12999 210 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 MELKQ14680 651 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 TIMM23BQ5SRD1 257 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 C1QTNF12Q5T7M4 302 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 FAM205BPQ63HN1 556 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 PGBD2Q6P3X8 592 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 C17orf78Q8N4C9 275 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 MUCL1Q96DR8 90 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 MUS81Q96NY9 551 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 ALKBH3Q96Q83 286 aaPredicted RBP12.56□□□□□ -0.4
CTSA-211ENST00000606066 SIGLEC7Q9Y286 467 aa12.56□□□□□ -0.4
CTSA-211ENST00000606066 NIPBLQ6KC79 2804 aaeCLIP12.56□□□□□ -0.4
CTSA-211ENST00000606066 A6NIZ1 184 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 RAD51DO75771 328 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 IGHMP01871 453 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 CD14P08571 375 aa12.55□□□□□ -0.4
CTSA-211ENST00000606066 ITGA5P08648 1049 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms