RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ASB6Q9NWX5 421 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 B3GAT1Q9P2W7 334 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 MOKQ9UQ07 419 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 PCDHGB7Q9Y5F8 929 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 URB1O60287 2271 aaKnown RBP16.1■□□□□ 0.17
VRK3-225ENST00000601912 PRSS37A4D1T9 235 aa16.1■□□□□ 0.17
VRK3-225ENST00000601912 APOL3O95236 402 aa16.1■□□□□ 0.17
VRK3-225ENST00000601912 GSTT1P30711 240 aa16.1■□□□□ 0.17
VRK3-225ENST00000601912 MELKQ14680 651 aa16.1■□□□□ 0.17
VRK3-225ENST00000601912 RAB39AQ14964 217 aa16.1■□□□□ 0.17
VRK3-225ENST00000601912 ASB18Q6ZVZ8 466 aa16.1■□□□□ 0.17
VRK3-225ENST00000601912 ZPLD1Q8TCW7 415 aa16.1■□□□□ 0.17
VRK3-225ENST00000601912 ASB10Q8WXI3 467 aa16.1■□□□□ 0.17
VRK3-225ENST00000601912 KISS1RQ969F8 398 aaPredicted RBP16.1■□□□□ 0.17
VRK3-225ENST00000601912 EXO5Q9H790 373 aa16.1■□□□□ 0.17
VRK3-225ENST00000601912 EXOSC1Q9Y3B2 195 aaKnown RBP16.1■□□□□ 0.17
VRK3-225ENST00000601912 H0YC42 278 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 H7C1C5 153 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 TFECO14948 347 aaPredicted RBP16.09■□□□□ 0.17
VRK3-225ENST00000601912 ACTL6AO96019 429 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 ENPP1P22413 925 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 EIF1AXP47813 144 aaKnown RBP16.09■□□□□ 0.17
VRK3-225ENST00000601912 CD97P48960 835 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 SUCLG1P53597 346 aaKnown RBP16.09■□□□□ 0.17
VRK3-225ENST00000601912 TMPRSS3P57727 454 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 LCN6P62502 163 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 ZNF169Q14929 603 aaPredicted RBP16.09■□□□□ 0.17
VRK3-225ENST00000601912 UBE2UQ5VVX9 321 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 B3GLCTQ6Y288 498 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 B3GNT6Q6ZMB0 384 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 MEIOBQ8N635 442 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 PROKR2Q8NFJ6 384 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 OR4F15Q8NGB8 312 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 OR10D3Q8NH80 312 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 ABTB1Q969K4 478 aaPredicted RBP16.09■□□□□ 0.17
VRK3-225ENST00000601912 ADGRG7Q96K78 797 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 MND1Q9BWT6 205 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 MFRPQ9BY79 579 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 SYT4Q9H2B2 425 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 ZDHHC11Q9H8X9 412 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 SRA1Q9HD15 236 aaKnown RBP16.09■□□□□ 0.17
VRK3-225ENST00000601912 VSX1Q9NZR4 365 aaPredicted RBP16.09■□□□□ 0.17
VRK3-225ENST00000601912 CEP295Q9C0D2 2601 aa16.09■□□□□ 0.17
VRK3-225ENST00000601912 ZNF814B7Z6K7 855 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 MYL12BO14950 172 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 AHCYL1O43865 530 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 GLCEO94923 617 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 INMTO95050 263 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 ZNF24P17028 368 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 PSMB9P28065 219 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 LHX2P50458 406 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 BCL2A1Q16548 175 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 SHFQ7M4L6 423 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 PM20D2Q8IYS1 436 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 POMGNT2Q8NAT1 580 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 OR51L1Q8NGJ5 315 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 OR6K6Q8NGW6 343 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 CPNE4Q96A23 557 aaPredicted RBP16.08■□□□□ 0.17
VRK3-225ENST00000601912 ALG12Q9BV10 488 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 SRXN1Q9BYN0 137 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 DEFB127Q9H1M4 99 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 MED29Q9NX70 200 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 TAS2R16Q9NYV7 291 aa16.08■□□□□ 0.17
VRK3-225ENST00000601912 TRGV5A0A0B4J1U4 118 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 CXCL13O43927 109 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 SEC14L2O76054 403 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 PTHP01270 115 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 ADRA2AP08913 450 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 SBK2P0C263 348 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 BIDP55957 195 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 RPS3AP61247 264 aaKnown RBP16.08■□□□□ 0.16
VRK3-225ENST00000601912 GGTLC2Q14390 218 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 POU4F3Q15319 338 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 RNFT1Q5M7Z0 435 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 SYT6Q5T7P8 510 aaPredicted RBP16.08■□□□□ 0.16
VRK3-225ENST00000601912 TRILQ7L0X0 811 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 ZNF367Q7RTV3 350 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 ACBD7Q8N6N7 88 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 EXD3Q8N9H8 876 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 OR13F1Q8NGS4 319 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 NEIL3Q8TAT5 605 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 ZMYND19Q96E35 227 aaPredicted RBP16.08■□□□□ 0.16
VRK3-225ENST00000601912 TXNDC15Q96J42 360 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 SF3B5Q9BWJ5 86 aaKnown RBP16.08■□□□□ 0.16
VRK3-225ENST00000601912 ADGRL4Q9HBW9 690 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 PAQR5Q9NXK6 330 aaPredicted RBP16.08■□□□□ 0.16
VRK3-225ENST00000601912 RAXQ9Y2V3 346 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 FKBP7Q9Y680 259 aa16.08■□□□□ 0.16
VRK3-225ENST00000601912 IGHV3-15A0A0B4J1V0 119 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 SLC22A23A1A5C7 686 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 CCDC160A6NGH7 325 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 ZNF726A6NNF4 738 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 NPIPA2E9PIF3 369 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 NPIPA3F8WFD2 350 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 TRAF3IP2O43734 574 aaPredicted RBP16.07■□□□□ 0.16
VRK3-225ENST00000601912 RAMP1O60894 148 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 IGHA1P01876 353 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 LCKP06239 509 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 ZNF708P17019 499 aa16.07■□□□□ 0.16
VRK3-225ENST00000601912 CRABP1P29762 137 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms