RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 MED29Q9NX70 200 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 KLHL13Q9P2N7 655 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 MCTS1Q9ULC4 181 aaKnown RBP20.17■□□□□ 0.82
IRF3-228ENST00000601291 OR6C68A6NDL8 312 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 AQP7O14520 342 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 FREM3P0C091 2139 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 SLC15A1P46059 708 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 SLC16A1P53985 500 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 TUBA4AP68366 448 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 TMED1Q13445 227 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 APOFQ13790 326 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 KLHL22Q53GT1 634 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 FAM180AQ6UWF9 173 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 GHDCQ8N2G8 530 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 OR9Q1Q8NGQ5 310 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 RNFT2Q96EX2 444 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 ZNF845Q96IR2 970 aaPredicted RBP20.16■□□□□ 0.82
IRF3-228ENST00000601291 DDOQ99489 341 aa20.16■□□□□ 0.82
IRF3-228ENST00000601291 RPRD1BQ9NQG5 326 aaKnown RBP20.16■□□□□ 0.82
IRF3-228ENST00000601291 WARS2Q9UGM6 360 aaKnown RBP20.16■□□□□ 0.82
IRF3-228ENST00000601291 CFAP47Q6ZTR5 3102 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 PRSS37A4D1T9 235 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 TRAF3IP2O43734 574 aaPredicted RBP20.15■□□□□ 0.82
IRF3-228ENST00000601291 CLPTM1O96005 669 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 SLC25A1P53007 311 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 BIDP55957 195 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 NADK2Q4G0N4 442 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 LCN1P1Q5VSP4 162 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 EEF1A1P5Q5VTE0 462 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 ABLIM2Q6H8Q1 611 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 FCRLAQ7L513 359 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 ZPLD1Q8TCW7 415 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 SARAFQ96BY9 339 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 WDYHV1Q96HA8 205 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 ADAD1Q96M93 576 aaKnown RBP20.15■□□□□ 0.82
IRF3-228ENST00000601291 NMNAT2Q9BZQ4 307 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 PLSCR2Q9NRY7 297 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 LUZP4Q9P127 313 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 ERVK-18Q9QC07 812 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 CAMK2AQ9UQM7 478 aa20.15■□□□□ 0.82
IRF3-228ENST00000601291 LOC400499M0QZD8 3231 aa20.14■□□□□ 0.82
IRF3-228ENST00000601291 H7C1C5 153 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 SLC2A5P22732 501 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 LCN6P62502 163 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 ST3GAL4Q11206 333 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 RAB40BQ12829 278 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 SLC17A1Q14916 467 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 SLC35D3Q5M8T2 416 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 PRSS48Q7RTY5 328 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 OR9K2Q8NGE7 335 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 OR2T4Q8NH00 348 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 ROBO4Q8WZ75 1007 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 SGCDQ92629 289 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 TXNDC15Q96J42 360 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 SYT4Q9H2B2 425 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 VSX1Q9NZR4 365 aaPredicted RBP20.14■□□□□ 0.81
IRF3-228ENST00000601291 TNFRSF10DQ9UBN6 386 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 NCOR2Q9Y618 2525 aa20.14■□□□□ 0.81
IRF3-228ENST00000601291 AHCYL1O43865 530 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 GYPBP06028 91 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 CDK1P06493 297 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 CLUP10909 449 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 SPI1P17947 270 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 PIGFQ07326 219 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 BLMHQ13867 455 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 PON3Q15166 354 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 NHLRC1Q6VVB1 395 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 CREB3L2Q70SY1 520 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 PM20D2Q8IYS1 436 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 OR6X1Q8NH79 312 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 TEAD3Q99594 435 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 PRORYQ9H606 182 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 VCX3AQ9NNX9 186 aa20.13■□□□□ 0.81
IRF3-228ENST00000601291 MRPS18AQ9NVS2 196 aaKnown RBP20.13■□□□□ 0.81
IRF3-228ENST00000601291 ZNF726A6NNF4 738 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 AKAP8O43823 692 aaKnown RBP20.12■□□□□ 0.81
IRF3-228ENST00000601291 CYTIPO60759 359 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 IGHG1P01857 330 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 HTR1AP08908 422 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 ATP6V1E1P36543 226 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 C3AR1Q16581 482 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 GTF2IRD2BQ6EKJ0 949 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 GTF2IRD2Q86UP8 949 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 SVOPQ8N4V2 548 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 CRELD1Q96HD1 420 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 TMEM80Q96HE8 168 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 EMC6Q9BV81 110 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 PRRG4Q9BZD6 226 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 PRDM14Q9GZV8 571 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 ASB6Q9NWX5 421 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 MOKQ9UQ07 419 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 IGF2RP11717 2491 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 CCDC182A6NF36 153 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 TRIM64CA6NLI5 447 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 TRMUO75648 421 aaKnown RBP20.12■□□□□ 0.81
IRF3-228ENST00000601291 FADS2O95864 444 aaKnown RBP20.12■□□□□ 0.81
IRF3-228ENST00000601291 STSP08842 583 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 CLDN17P56750 224 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 POU4F2Q12837 409 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 DNM1P34Q6PK57 102 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms