RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 NXF5Q9H1B4 397 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 TAS2R10Q9NYW0 307 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 PRODH2Q9UF12 536 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 LAMP5Q9UJQ1 280 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 ING1Q9UK53 422 aaPredicted RBP18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 MMP17Q9ULZ9 603 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 MOKQ9UQ07 419 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 ANKRD20A5PA0PJZ0 165 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 C17orf51A8MQB3 221 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 A8MUA0 341 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 SCDO00767 359 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 CALCBP10092 127 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 ART1P52961 327 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 BLVRAP53004 296 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 EXOSC2Q13868 293 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 LINC00303Q3SY05 128 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 ELFN2Q5R3F8 820 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 KCTD20Q7Z5Y7 419 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 LRRTM1Q86UE6 522 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 CCDC28AQ8IWP9 274 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 DND1Q8IYX4 353 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 PRR22Q8IZ63 422 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 LIPHQ8WWY8 451 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 MIB2Q96AX9 1013 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 TCTN2Q96GX1 697 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 NOX3Q9HBY0 568 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 PNO1Q9NRX1 252 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 GMEB2Q9UKD1 530 aa18.37■□□□□ 0.53
SHKBP1-225ENST00000600733 A0A1B0GTQ1 180 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 BLACEA4D250 179 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 LINC00862A6NCI5 91 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 H0YC42 278 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 ZNF264O43296 627 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 ICMTO60725 284 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 UTS2O95399 124 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 RAB40ALP0C0E4 278 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 APEHP13798 732 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 TAS2R20P59543 309 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 TOR2AQ5JU69 321 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 CEP76Q8TAP6 659 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 RAB40AQ8WXH6 277 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 CCDC74AQ96AQ1 378 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 ULBP3Q9BZM4 244 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 RTN4RQ9BZR6 473 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 SYT4Q9H2B2 425 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 EMC3Q9P0I2 261 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 SEC16AO15027 2179 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 PCDH15Q96QU1 1955 aa18.36■□□□□ 0.53
SHKBP1-225ENST00000600733 TRBV5-5A0A0J9YX44 114 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 A0A1B0GUH1 482 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 NAP1L6A6NFF2 107 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 SULT1B1O43704 296 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 ANXA7P20073 488 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 TACR3P29371 465 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 LCN1P31025 176 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 METTL11BQ5VVY1 283 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 POMZP3Q6PJE2 187 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 FTMTQ8N4E7 242 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 ZNF563Q8TA94 476 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 PTPMT1Q8WUK0 201 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 TAAR8Q969N4 342 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 MED30Q96HR3 178 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 PCDHGA5Q9Y5G8 931 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 OR4C45A6NMZ5 311 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 CHURC1-FNTBB4DL54 471 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 PRAF2O60831 178 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 CFDP00746 253 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 MAPK3P27361 379 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 ADH7P40394 386 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 CAPZBP47756 277 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 FNTBP49356 437 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 GFERP55789 205 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 SLC37A1P57057 533 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 ARPC4P59998 168 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 EID2Q8N6I1 236 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 OR2G2Q8NGZ5 317 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 ADAMTS18Q8TE60 1221 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 THEM6Q8WUY1 208 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 TMEM106AQ96A25 262 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 ADOQ96SZ5 270 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 OR8D2Q9GZM6 311 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 CLEC4MQ9H2X3 399 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 NPDC1Q9NQX5 325 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 GPR27Q9NS67 375 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 CA10Q9NS85 328 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 SOHLH2Q9NX45 425 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 SLC6A5Q9Y345 797 aa18.35■□□□□ 0.53
SHKBP1-225ENST00000600733 ANXA2P2A6NMY6 339 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 IL33O95760 270 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 ANXA2P07355 339 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 CD1CP29017 333 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 RPL6Q02878 288 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 PUDPQ08623 228 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 GPR139Q6DWJ6 353 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 LRRC69Q6ZNQ3 347 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 ZNF676Q8N7Q3 588 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 CCNL2Q96S94 520 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 AMELYQ99218 206 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 SEMA4CQ9C0C4 833 aa18.34■□□□□ 0.53
SHKBP1-225ENST00000600733 ZNF69Q9UC07 566 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms