RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	CENPBD1	B2RD01	187 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	NPIPB4	C9JG80	1138 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523		M0R3G1	203 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	E2F6	O75461	281 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	ZNF432	O94892	652 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	CST1	P01037	141 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	F13B	P05160	661 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	HLA-DOB	P13765	273 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	MAK	P20794	623 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	ARHGDIA	P52565	204 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	RAP1B	P61224	184 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	RAP1A	P62834	184 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	CAMK2D	Q13557	499 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	PPA1	Q15181	289 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	C9orf135	Q5VTT2	229 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	LSR	Q86X29	649 aa	Predicted RBP	11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	C20orf196	Q8IYI0	205 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	OR13C2	Q8NGS9	318 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	FNDC8	Q8TC99	324 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	TXNDC15	Q96J42	360 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	MUS81	Q96NY9	551 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	OBP2B	Q9NPH6	170 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	ASH1L	Q9NR48	2969 aa	Known RBP	11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	GRHPR	Q9UBQ7	328 aa		11.46	□□□□□ -0.57
SRRM1-223	ENST00000600523	TRAV27	A0A087WT01	109 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	UNC119B	A6NIH7	251 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	RPL36A-HNRNPH2	H7BZ11	118 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	XKRY	O14609	159 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	UPK3A	O75631	287 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	CTAG2	O75638	210 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	CCNB2	O95067	398 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	NDUFB2	O95178	105 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	HOXB1	P14653	301 aa	Predicted RBP	11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	EDNRA	P25101	427 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	GUCA1A	P43080	201 aa	Predicted RBP	11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	HMGA2	P52926	109 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	CTXN1	P60606	82 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	RPS4X	P62701	263 aa	Known RBP	11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	LAPTM4A	Q15012	233 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	TSC22D1	Q15714	1073 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	TAB1	Q15750	504 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	GABRA6	Q16445	453 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	ACKR1	Q16570	336 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	RPL13AP3	Q6NVV1	102 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	ANKRD16	Q6P6B7	361 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	CCDC36	Q8IYA8	594 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	ADGRG5	Q8IZF4	528 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	ZNF295-AS1	Q8N0V1	137 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	TMEM123	Q8N131	208 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	GNPDA2	Q8TDQ7	276 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	CANT1	Q8WVQ1	401 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	PIK3IP1	Q96FE7	263 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	TNFRSF13C	Q96RJ3	184 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	TXNIP	Q9H3M7	391 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	CRLF2	Q9HC73	371 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	RASSF1	Q9NS23	344 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	GLTP	Q9NZD2	209 aa		11.45	□□□□□ -0.58
SRRM1-223	ENST00000600523	UTP20	O75691	2785 aa	Known RBP	11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	ZNF99	A8MXY4	864 aa	Predicted RBP	11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	PDLIM1	O00151	329 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	ITGA5	P08648	1049 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	ACADS	P16219	412 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	FPR3	P25089	353 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	OMP	P47874	163 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	ZNF84	P51523	738 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	RPS6KA3	P51812	740 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	RPL27	P61353	136 aa	Known RBP	11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	TOP3A	Q13472	1001 aa	Predicted RBP	11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	MELK	Q14680	651 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	SEC23B	Q15437	767 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	CEACAM16	Q2WEN9	425 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	IQCC	Q4KMZ1	466 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	TMEM108	Q6UXF1	575 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	MEX3D	Q86XN8	651 aa	Known RBP	11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	DEPDC4	Q8N2C3	294 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	OR1K1	Q8NGR3	316 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	OR52N5	Q8NH56	324 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	MOSPD2	Q8NHP6	518 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	NANOS1	Q8WY41	292 aa	Known RBP	11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	RBP7	Q96R05	134 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	GPR35	Q9HC97	309 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	LYVE1	Q9Y5Y7	322 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523		U3KQV3	271 aa		11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.44	□□□□□ -0.58
SRRM1-223	ENST00000600523	TCRBV3S1	A0A5B6	114 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	DEAF1	O75398	565 aa	Predicted RBP	11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	FARS2	O95363	451 aa	Known RBP	11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	IGHM	P01871	453 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	CD3E	P07766	207 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	CD14	P08571	375 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	TSPAN19	P0C672	248 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	FCGR1A	P12314	374 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	GSTM3	P21266	225 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	SLC6A6	P31641	620 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	ACVR1B	P36896	505 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	CAPZA2	P47755	286 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	LSM11	P83369	360 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	ARF1	P84077	181 aa	Known RBP	11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms