RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 TTYH2Q9BSA4 534 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 NAA11Q9BSU3 229 aaPredicted RBP5.7□□□□□ -1.5
VPS4B-205ENST00000591383 TMEM43Q9BTV4 400 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 PTDSS2Q9BVG9 487 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 KLHL4Q9C0H6 718 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 MMADHCQ9H3L0 296 aaPredicted RBP5.7□□□□□ -1.5
VPS4B-205ENST00000591383 REEP1Q9H902 201 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 CALHM2Q9HA72 323 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 CHST11Q9NPF2 352 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 KRCC1Q9NPI7 259 aaPredicted RBP5.7□□□□□ -1.5
VPS4B-205ENST00000591383 COQ3Q9NZJ6 369 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 EMC3Q9P0I2 261 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 KLHL9Q9P2J3 617 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 SEC14L4Q9UDX3 406 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 Q9UFV3 132 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 TMCC3Q9ULS5 477 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 MED31Q9Y3C7 131 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 SAMHD1Q9Y3Z3 626 aaKnown RBP5.7□□□□□ -1.5
VPS4B-205ENST00000591383 USP9YO00507 2555 aaPredicted RBP5.7□□□□□ -1.5
VPS4B-205ENST00000591383 HECTD1Q9ULT8 2610 aa5.7□□□□□ -1.5
VPS4B-205ENST00000591383 ANKHD1Q8IWZ3 2542 aaKnown RBP5.7□□□□□ -1.5
VPS4B-205ENST00000591383 DOPEY2Q9Y3R5 2298 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 TRBV4-1A0A0J9YWV2 114 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 A0A1W2PPL8 197 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 TCRBV3S1A0A5B6 114 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 A1L4Q6 167 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 AQP7P3A6NL99 342 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 HSPB2A8KAH6 182 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 ZNF814B7Z6K7 855 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 C11orf98E9PRG8 122 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 GNGT2O14610 69 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 DNPH1O43598 174 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 OR2T1O43869 369 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 EIF1BO60739 113 aaKnown RBP5.69□□□□□ -1.5
VPS4B-205ENST00000591383 RAMP1O60894 148 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 NPIPB7O75200 414 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 FKBP6O75344 327 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 TIPRLO75663 272 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 OR7A10O76100 309 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 PRSS23O95084 383 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 OR6A2O95222 327 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 CST1P01037 141 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 BGLAPP02818 100 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 RNF224P0DH78 156 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 THRBP10828 461 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 IFI30P13284 250 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 FUT1P19526 365 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 FKBP2P26885 142 aaKnown RBP5.69□□□□□ -1.5
VPS4B-205ENST00000591383 AGTR1P30556 359 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 CHRNB4P30926 498 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 MAGEA2P43356 314 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 CLK1P49759 484 aaKnown RBP5.69□□□□□ -1.5
VPS4B-205ENST00000591383 SMIM11AP58511 58 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 RAC3P60763 192 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 EGR4Q05215 589 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 RASGEF1BQ0VAM2 473 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 FOXF2Q12947 444 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 PMS2P3Q13401 168 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 TOP3AQ13472 1001 aaPredicted RBP5.69□□□□□ -1.5
VPS4B-205ENST00000591383 RNPS1Q15287 305 aaKnown RBP5.69□□□□□ -1.5
VPS4B-205ENST00000591383 HSPB2Q16082 182 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 EXOC3L2Q2M3D2 409 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 VWA1Q6PCB0 445 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 PODNL1Q6PEZ8 512 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 PAQR6Q6TCH4 344 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 SEM1Q6ZVN7 128 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 CXXC5Q7LFL8 322 aaKnown RBP5.69□□□□□ -1.5
VPS4B-205ENST00000591383 RRM2BQ7LG56 351 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 TSEN54Q7Z6J9 526 aaKnown RBP5.69□□□□□ -1.5
VPS4B-205ENST00000591383 YTHDF3Q7Z739 585 aaKnown RBP5.69□□□□□ -1.5
VPS4B-205ENST00000591383 MRGPRGQ86SM5 289 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 ADGRE4PQ86SQ3 457 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 LIX1LQ8IVB5 337 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 TMEM99Q8N816 258 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 RNF152Q8N8N0 203 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 PIK3C3Q8NEB9 887 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 OR4K5Q8NGD3 323 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 OR13C2Q8NGS9 318 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 MFSD8Q8NHS3 518 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 FANK1Q8TC84 345 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 SSC4DQ8WTU2 575 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 CA5BP1Q8WTZ4 195 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 PYDC1Q8WXC3 89 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 ACOT11Q8WXI4 607 aaPredicted RBP5.69□□□□□ -1.5
VPS4B-205ENST00000591383 POP5Q969H6 163 aaKnown RBP5.69□□□□□ -1.5
VPS4B-205ENST00000591383 TAAR8Q969N4 342 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 SGTBQ96EQ0 304 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 ZFP3Q96NJ6 502 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 ZNF347Q96SE7 839 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 PRSS27Q9BQR3 290 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 SFXN3Q9BWM7 321 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 POTEKPQ9BYX7 375 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 SLC19A3Q9BZV2 496 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 YY1AP1Q9H869 796 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 RNF122Q9H9V4 155 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 NMNAT1Q9HAN9 279 aaPredicted RBP5.69□□□□□ -1.5
VPS4B-205ENST00000591383 IL1RAPQ9NPH3 570 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 NANSQ9NR45 359 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 C20orf141Q9NUB4 165 aa5.69□□□□□ -1.5
VPS4B-205ENST00000591383 VNN3Q9NY84 501 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms