RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CXCR6O00574 342 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 CLOCKO15516 846 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 SHOX2O60902 331 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-211ENST00000590499 IGF2P01344 180 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 ASAH2BP0C7U1 165 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 NQO1P15559 274 aaKnown RBP9.8□□□□□ -0.84
SMAD4-211ENST00000590499 PAX1P15863 534 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 UGT2B15P54855 530 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 PSME3P61289 254 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 ADAM8P78325 824 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 PUDPQ08623 228 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 PMS2P3Q13401 168 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 PIN1Q13526 163 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-211ENST00000590499 C1DQ13901 141 aaKnown RBP9.8□□□□□ -0.84
SMAD4-211ENST00000590499 ZNF672Q499Z4 452 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-211ENST00000590499 TTC33Q6PID6 262 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-211ENST00000590499 DEF8Q6ZN54 512 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 SLC46A3Q7Z3Q1 461 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 ABHD12BQ7Z5M8 362 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-211ENST00000590499 PXKQ7Z7A4 578 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 VTCN1Q7Z7D3 282 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 NKAIN4Q8IVV8 208 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 UEVLDQ8IX04 471 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 LRRC75A-AS1Q8N1F1 130 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 OR1K1Q8NGR3 316 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 OR5J2Q8NH18 312 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 BCL2L2Q92843 193 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-211ENST00000590499 CITED4Q96RK1 184 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 RIMS3Q9UJD0 308 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 A4GNTQ9UNA3 340 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 ARL2BPQ9Y2Y0 163 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 AMDHD2Q9Y303 409 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 NOX1Q9Y5S8 564 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 C2CD3Q4AC94 2353 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 TLN2Q9Y4G6 2542 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 KPNA4O00629 521 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-211ENST00000590499 NDUFAB1O14561 156 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 ABCD4O14678 606 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 AKAP8O43823 692 aaKnown RBP9.79□□□□□ -0.84
SMAD4-211ENST00000590499 TMCC2O75069 709 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 SLC43A1O75387 559 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 CH25HO95992 272 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 WNT11O96014 354 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 MT-ND1P03886 318 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 DANCRP0C864 163 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 THRBP10828 461 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 FUT4P22083 530 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 PTAFRP25105 342 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 CD40P25942 277 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 RBM34P42696 430 aaKnown RBP9.79□□□□□ -0.84
SMAD4-211ENST00000590499 ZNF83P51522 516 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 SH3BGRP55822 239 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-211ENST00000590499 TAS2R41P59536 307 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 ROR2Q01974 943 aaKnown RBP9.79□□□□□ -0.84
SMAD4-211ENST00000590499 POU3F1Q03052 451 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-211ENST00000590499 ZP4Q12836 540 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 FXNQ16595 210 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 TBRG1Q3YBR2 411 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 HIKESHIQ53FT3 197 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 PHYHD1Q5SRE7 291 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 CBLL1Q75N03 491 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 C20orf196Q8IYI0 205 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 C10orf53Q8N6V4 93 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 LRRC17Q8N6Y2 441 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 WFDC11Q8NEX6 87 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 MAGEE2Q8TD90 523 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-211ENST00000590499 TMEM255BQ8WV15 326 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 FBXW5Q969U6 566 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 TXNDC15Q96J42 360 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 TPD52L3Q96J77 140 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 PRRC1Q96M27 445 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 GPR35Q9HC97 309 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 SPAG4Q9NPE6 437 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 OBP2BQ9NPH6 170 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 NANSQ9NR45 359 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 DLL4Q9NR61 685 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 MAN2C1Q9NTJ4 1040 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 C20orf141Q9NUB4 165 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 ZNF701Q9NV72 531 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-211ENST00000590499 MED29Q9NX70 200 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 TAS2R5Q9NYW4 299 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 ZNF229Q9UJW7 825 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 SNX13Q9Y5W8 968 aa9.79□□□□□ -0.84
SMAD4-211ENST00000590499 NF1P21359 2839 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 ARPC4-TTLL3A0A0A6YYG9 625 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 FFAR1O14842 300 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 SMPD2O60906 423 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 KRT33AO76009 404 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 PRSS23O95084 383 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 SOD3P08294 240 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 TSPAN19P0C672 248 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 ADORA3P0DMS8 318 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 CDH2P19022 906 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-211ENST00000590499 PRPS1P60891 318 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 SPOCK1Q08629 439 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 FOXD4Q12950 439 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-211ENST00000590499 PGGHGQ32M88 737 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 HMBOX1Q6NT76 420 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 ANKRD16Q6P6B7 361 aa9.78□□□□□ -0.84
SMAD4-211ENST00000590499 KLHL17Q6TDP4 642 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms