RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 C18orf12Q96KH6 178 aa10.55□□□□□ -0.72
TPM4-212ENST00000590180 LRR1Q96L50 414 aa10.55□□□□□ -0.72
TPM4-212ENST00000590180 BDH2Q9BUT1 245 aa10.55□□□□□ -0.72
TPM4-212ENST00000590180 ZNF426Q9BUY5 554 aa10.55□□□□□ -0.72
TPM4-212ENST00000590180 ULBP2Q9BZM5 246 aa10.55□□□□□ -0.72
TPM4-212ENST00000590180 RHCGQ9UBD6 479 aa10.55□□□□□ -0.72
TPM4-212ENST00000590180 MOKQ9UQ07 419 aa10.55□□□□□ -0.72
TPM4-212ENST00000590180 ARL2BPQ9Y2Y0 163 aa10.55□□□□□ -0.72
TPM4-212ENST00000590180 MED31Q9Y3C7 131 aa10.55□□□□□ -0.72
TPM4-212ENST00000590180 SNX13Q9Y5W8 968 aa10.55□□□□□ -0.72
TPM4-212ENST00000590180 C2CD3Q4AC94 2353 aa10.55□□□□□ -0.72
TPM4-212ENST00000590180 ARPC4-TTLL3A0A0A6YYG9 625 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 IGHV1-18A0A0C4DH31 117 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 ZNF99A8MXY4 864 aaPredicted RBP10.54□□□□□ -0.72
TPM4-212ENST00000590180 OVOL3O00110 214 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 SMAD7O15105 426 aaKnown RBP10.54□□□□□ -0.72
TPM4-212ENST00000590180 SEC14L2O76054 403 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 OR7A10O76100 309 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 CRYAAP02489 173 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 F13BP05160 661 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 ASAH2BP0C7U1 165 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 THRBP10828 461 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 PAX1P15863 534 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 AQP2P41181 271 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 CSNK1A1P48729 337 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 GLYATQ6IB77 296 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 ZNF813Q6ZN06 617 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 CBLL1Q75N03 491 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 SLC46A3Q7Z3Q1 461 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 MUC15Q8N387 334 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 RNF148Q8N7C7 305 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 OR6X1Q8NH79 312 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 PRRC1Q96M27 445 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 ADAD1Q96M93 576 aaKnown RBP10.54□□□□□ -0.72
TPM4-212ENST00000590180 SLC38A2Q96QD8 506 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 LRRC37BQ96QE4 947 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 TRAF4Q9BUZ4 470 aaPredicted RBP10.54□□□□□ -0.72
TPM4-212ENST00000590180 NELFAQ9H3P2 528 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 GSX1Q9H4S2 264 aaPredicted RBP10.54□□□□□ -0.72
TPM4-212ENST00000590180 C20orf141Q9NUB4 165 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 EGFL7Q9UHF1 273 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 A4GNTQ9UNA3 340 aa10.54□□□□□ -0.72
TPM4-212ENST00000590180 CSPG4Q6UVK1 2322 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 RAI1Q7Z5J4 1906 aaPredicted RBP10.53□□□□□ -0.72
TPM4-212ENST00000590180 A0A1W2PRG6 482 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 TRIM64A6NGJ6 449 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 TRIM64BA6NI03 449 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 ATP6V1G2-DDX39BF2Z307 99 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 H7C1Q1 480 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 J3KTA2 159 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 INHBBP09529 407 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 CD79AP11912 226 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 IFI30P13284 250 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 CBR1P16152 277 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 MXRA7P84157 204 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 RPL18Q07020 188 aaKnown RBP10.53□□□□□ -0.72
TPM4-212ENST00000590180 PIGFQ07326 219 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 MELKQ14680 651 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 LAPTM4AQ15012 233 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 TRAM2Q15035 370 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 B3GLCTQ6Y288 498 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 RRM2BQ7LG56 351 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 WDFY1Q8IWB7 410 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 CCDC36Q8IYA8 594 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 GEMIN6Q8WXD5 167 aaKnown RBP10.53□□□□□ -0.72
TPM4-212ENST00000590180 ZNF566Q969W8 418 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 SLC25A44Q96H78 314 aaPredicted RBP10.53□□□□□ -0.72
TPM4-212ENST00000590180 HSH2DQ96JZ2 352 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 MOV10Q9HCE1 1003 aaKnown RBP10.53□□□□□ -0.72
TPM4-212ENST00000590180 SPAG4Q9NPE6 437 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 DLL4Q9NR61 685 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 INIPQ9NRY2 104 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 CBLN4Q9NTU7 201 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 ARL8BQ9NVJ2 186 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 GLTPQ9NZD2 209 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 TAGLN3Q9UI15 199 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 RPS6KA6Q9UK32 745 aa10.53□□□□□ -0.72
TPM4-212ENST00000590180 MCIDASD6RGH6 385 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 DYNC1I1O14576 645 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 PIP5K1CO60331 668 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 DCTN3O75935 186 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 HLA-HP01893 362 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 CECR9P0C854 216 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 B4GALT1P15291 398 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 TCN1P20061 433 aaPredicted RBP10.52□□□□□ -0.73
TPM4-212ENST00000590180 APOBEC3AP31941 199 aaPredicted RBP10.52□□□□□ -0.73
TPM4-212ENST00000590180 ARR3P36575 388 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 IDH3GP51553 393 aaPredicted RBP10.52□□□□□ -0.73
TPM4-212ENST00000590180 CLRN1P58418 232 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 CHRNB3Q05901 458 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 NPRL3Q12980 569 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 RAB35Q15286 201 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 CLEC12BQ2HXU8 276 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 ZNF544Q6NX49 715 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 DTX2Q86UW9 622 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 MDP1Q86V88 176 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 CYP4Z1Q86W10 505 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 MEX3DQ86XN8 651 aaKnown RBP10.52□□□□□ -0.73
TPM4-212ENST00000590180 CDK20Q8IZL9 346 aa10.52□□□□□ -0.73
TPM4-212ENST00000590180 CIARTQ8N365 385 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms