RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ALOX5APP20292 161 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 RPL27P61353 136 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 LCN6P62502 163 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 IFITM2Q01629 132 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 NTRK2Q16620 822 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 C1orf140Q5VVS0 124 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 LANCL3Q6ZV70 420 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 COX15Q7KZN9 410 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 RNF166Q96A37 237 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 MAP6Q96JE9 813 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 PTDSS2Q9BVG9 487 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 TCF7L1Q9HCS4 588 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 AKAP7Q9P0M2 348 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 COPZ2Q9P299 210 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 KLHDC2Q9Y2U9 406 aa17.35■□□□□ 0.37
PRKCSH-209ENST00000589838 ACOD1A6NK06 481 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 PRR32B1ATL7 298 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 C11orf98E9PRG8 122 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 NPIPB7O75200 414 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 DXOO77932 396 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 AHSA1O95433 338 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 ABHD16AO95870 558 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 HEXBP07686 556 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 ARSBP15848 533 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 RRAS2P62070 204 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 CD83Q01151 205 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 SHBQ15464 509 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 ADGRG3Q86Y34 549 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 PM20D2Q8IYS1 436 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 OR4D9Q8NGE8 314 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 OR6S1Q8NH40 331 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 LGALS14Q8TCE9 139 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 ASB17Q8WXJ9 295 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 YIPF5Q969M3 257 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 SMAD5Q99717 465 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 SEMA4CQ9C0C4 833 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 SYT4Q9H2B2 425 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 TXNIPQ9H3M7 391 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 SPTBN5Q9NRC6 3674 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 CLEC4AQ9UMR7 237 aa17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 MRPS7Q9Y2R9 242 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-209ENST00000589838 TMEM212A6NML5 194 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 RAF1P04049 648 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 ANKRD34CP0C6C1 535 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 RASGEF1BQ0VAM2 473 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 SF3B4Q15427 424 aaKnown RBP eCLIP17.33■□□□□ 0.377e-7■■■■□ 21.5
PRKCSH-209ENST00000589838 NR0B2Q15466 257 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 SLC36A2Q495M3 483 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 C1QL3Q5VWW1 255 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 ZNF433Q8N7K0 673 aaPredicted RBP17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 DUSP19Q8WTR2 217 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 THEM6Q8WUY1 208 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 RGP1Q92546 391 aaPredicted RBP17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 NSMAFQ92636 917 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 AKAP1Q92667 903 aaKnown RBP eCLIP17.33■□□□□ 0.375e-8■■■■■ 27.4
PRKCSH-209ENST00000589838 ZFP3Q96NJ6 502 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 FRRS1LQ9P0K9 344 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 NUBP2Q9Y5Y2 271 aa17.33■□□□□ 0.37
PRKCSH-209ENST00000589838 A0A0B4J203 849 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 TRBV5-5A0A0J9YX44 114 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 PRSS37A4D1T9 235 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 AKR7A3O95154 331 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 IGHMP01871 453 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 CALCBP10092 127 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 HOXD12P35452 270 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 CDK10Q15131 360 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 DPY19L4Q7Z388 723 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 ANKRD37Q7Z713 158 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 LIX1LQ8IVB5 337 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 FYTTD1Q96QD9 318 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 SLC22A11Q9NSA0 550 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 B9D1Q9UPM9 204 aa17.33■□□□□ 0.36
PRKCSH-209ENST00000589838 FER1L5A0AVI2 2057 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 SULT1B1O43704 296 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 RAB40ALP0C0E4 278 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 GSTT2P0CG29 244 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 GSTT2BP0CG30 244 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 AGFG1P52594 562 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 C17orf67Q0P5P2 114 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 DYRK1AQ13627 763 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 ACKR1Q16570 336 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 NKAIN1Q4KMZ8 207 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 HES5Q5TA89 166 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 SLC22A10Q63ZE4 541 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 LRRN1Q6UXK5 716 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 CMTM4Q8IZR5 234 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 ZNF248Q8NDW4 579 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 OR2G2Q8NGZ5 317 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 OTOSQ8NHW6 89 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 NUBPLQ8TB37 319 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 ZNF519Q8TB69 540 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 RAB40AQ8WXH6 277 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 ST8SIA1Q92185 356 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 TRAF4Q9BUZ4 470 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 SLC25A18Q9H1K4 315 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 VSX1Q9NZR4 365 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 SIT1Q9Y3P8 196 aa17.32■□□□□ 0.36
PRKCSH-209ENST00000589838 ANKUB1A6NFN9 424 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 CENPBD1B2RD01 187 aa17.31■□□□□ 0.36
PRKCSH-209ENST00000589838 ERP29P30040 261 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms