RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 DUX4L6P0CJ89 424 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 DUX4L7P0CJ90 424 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 OR8G3PP0DMU2 310 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 RABIFP47224 123 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 SERTAD2Q14140 314 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 ZNF267Q14586 743 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-206ENST00000587730 PRTGQ2VWP7 1150 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 HIST3H2AQ7L7L0 130 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 SERPINA12Q8IW75 414 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 C10orf53Q8N6V4 93 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 LSM14AQ8ND56 463 aaKnown RBP16.91■□□□□ 0.3
DDX39A-206ENST00000587730 OR6N1Q8NGY5 312 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 HIST1H2ACQ93077 130 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 Q96M85 177 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 CHIAQ9BZP6 476 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 FRRS1LQ9P0K9 344 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 UPB1Q9UBR1 384 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 DUX4Q9UBX2 424 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 GLS2Q9UI32 602 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 MRTO4Q9UKD2 239 aaKnown RBP16.91■□□□□ 0.3
DDX39A-206ENST00000587730 A0A1W2PPC1 479 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 TMEM72A0PK05 275 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 OR4C45A6NMZ5 311 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 KRBOX1C9JBD0 128 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 H0Y8X5 98 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 UBL4AP11441 157 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 HPGDP15428 266 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 S100A11P31949 105 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 HSD17B7P56937 341 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 CTXN1P60606 82 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 SEC61A1P61619 476 aaKnown RBP16.91■□□□□ 0.3
DDX39A-206ENST00000587730 ZNF676Q8N7Q3 588 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 SCARB1Q8WTV0 552 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 ASB17Q8WXJ9 295 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 SPACA7Q96KW9 195 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 OR10A5Q9H207 317 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 MMP25Q9NPA2 562 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 LRIT1Q9P2V4 623 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 ING1Q9UK53 422 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-206ENST00000587730 BLOC1S5-TXNDC5H3BN57 136 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 CDC40O60508 579 aaKnown RBP eCLIP16.9■□□□□ 0.3
DDX39A-206ENST00000587730 CFDP00746 253 aaPredicted RBP16.9■□□□□ 0.3
DDX39A-206ENST00000587730 ASAH2BP0C7U1 165 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 PPP3CBP16298 524 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 COL9A1P20849 921 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 ITPKBP27987 946 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 DCTDP32321 178 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 PBX2P40425 430 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 AQP2P41181 271 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 SLC6A8P48029 635 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 TMEM65Q6PI78 240 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 MCATQ8IVS2 390 aaKnown RBP16.9■□□□□ 0.3
DDX39A-206ENST00000587730 SLC38A6Q8IZM9 456 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 C19orf47Q8N9M1 422 aaKnown RBP16.9■□□□□ 0.3
DDX39A-206ENST00000587730 AVL9Q8NBF6 648 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 C7orf57Q8NEG2 295 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 OR2G2Q8NGZ5 317 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 C16orf52Q8NHV5 167 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 ZPLD1Q8TCW7 415 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 PIGKQ92643 395 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 ARSGQ96EG1 525 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 ALX4Q9H161 411 aaPredicted RBP16.9■□□□□ 0.3
DDX39A-206ENST00000587730 TSPAN10Q9H1Z9 355 aaPredicted RBP16.9■□□□□ 0.3
DDX39A-206ENST00000587730 IKZF2Q9UKS7 526 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 PCDHGA5Q9Y5G8 931 aa16.9■□□□□ 0.3
DDX39A-206ENST00000587730 GGT3PA6NGU5 568 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 SULT1C2O00338 296 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 RPP14O95059 124 aaKnown RBP16.89■□□□□ 0.29
DDX39A-206ENST00000587730 NSA2O95478 260 aaKnown RBP16.89■□□□□ 0.29
DDX39A-206ENST00000587730 MELTFP08582 738 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 AKAIN1P0CW23 69 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 ADRA2CP18825 462 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 CXCL2P19875 107 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 ANXA7P20073 488 aaKnown RBP16.89■□□□□ 0.29
DDX39A-206ENST00000587730 ENPP1P22413 925 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-206ENST00000587730 CLDN12P56749 244 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 ACTBP60709 375 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 ACTG1P63261 375 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 PCGF3Q3KNV8 242 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 SLC36A1Q7Z2H8 476 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 CDH26Q8IXH8 852 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 ZNF511Q8NB15 262 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 OR4C3Q8NH37 302 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 CCDC107Q8WV48 283 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 DPYSL5Q9BPU6 564 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 FKRPQ9H9S5 495 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 PFDN2Q9UHV9 154 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 ERVK-19Q9WJR5 959 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 YBX2Q9Y2T7 364 aaKnown RBP16.89■□□□□ 0.29
DDX39A-206ENST00000587730 DOCK9Q9BZ29 2069 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 IDSB3KWA1 339 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 SOX1O00570 391 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-206ENST00000587730 SCDO00767 359 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 ZNF250P15622 560 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 ALOX5APP20292 161 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 MRPS21P82921 87 aaKnown RBP16.89■□□□□ 0.29
DDX39A-206ENST00000587730 EEF1A1P5Q5VTE0 462 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 FNDC7Q5VTL7 733 aa16.89■□□□□ 0.29
DDX39A-206ENST00000587730 PARM1Q6UWI2 310 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms