RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CBLN4Q9NTU7 201 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 TAS2R16Q9NYV7 291 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 TRAPPC4Q9Y296 219 aa13.7□□□□□ -0.22
SKA2-209ENST00000583976 YLPM1P49750 1951 aaKnown RBP13.7□□□□□ -0.22
SKA2-209ENST00000583976 TRAV36DV7A0A075B6V5 113 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 TCRBV5S2A0A599 114 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 LRRN3E7EW58 273 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 PDLIM1O00151 329 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 ACOT8O14734 319 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 FFAR1O14842 300 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 IFNA8P32881 189 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 ERFP50548 548 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 VLDLRP98155 873 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 SRSF2Q01130 221 aaKnown RBP13.69□□□□□ -0.22
SKA2-209ENST00000583976 ST3GAL3Q11203 375 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 GABRA6Q16445 453 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 PODNL1Q6PEZ8 512 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 LINC00114Q6XXX2 140 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 P2RY8Q86VZ1 359 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 TMEM99Q8N816 258 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 WDR31Q8NA23 367 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 PIGXQ8TBF5 258 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 TMEM255BQ8WV15 326 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 NANOS1Q8WY41 292 aaKnown RBP13.69□□□□□ -0.22
SKA2-209ENST00000583976 C7orf34Q96L11 122 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 ADAD1Q96M93 576 aaKnown RBP13.69□□□□□ -0.22
SKA2-209ENST00000583976 NAA11Q9BSU3 229 aaPredicted RBP13.69□□□□□ -0.22
SKA2-209ENST00000583976 POLR2J2Q9GZM3 115 aaKnown RBP13.69□□□□□ -0.22
SKA2-209ENST00000583976 POLR2J3Q9H1A7 115 aaKnown RBP13.69□□□□□ -0.22
SKA2-209ENST00000583976 LRMDAQ9H2I8 198 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 ASB6Q9NWX5 421 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 NDUFAF4Q9P032 175 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 FAM32AQ9Y421 112 aaKnown RBP13.69□□□□□ -0.22
SKA2-209ENST00000583976 ENPP4Q9Y6X5 453 aa13.69□□□□□ -0.22
SKA2-209ENST00000583976 ATP6V1G2-DDX39BF2Z307 99 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 SEMG1P04279 462 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 PTAFRP25105 342 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 GTF2E2P29084 291 aaKnown RBP13.68□□□□□ -0.22
SKA2-209ENST00000583976 FABP6P51161 128 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 SLC16A1P53985 500 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 TRAP1Q12931 704 aaKnown RBP13.68□□□□□ -0.22
SKA2-209ENST00000583976 FLOT2Q14254 428 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 PDK3Q15120 406 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 OTUD3Q5T2D3 398 aaPredicted RBP13.68□□□□□ -0.22
SKA2-209ENST00000583976 FAM69AQ5T7M9 428 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 CYP4Z1Q86W10 505 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 FBXL14Q8N1E6 418 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 MFSD8Q8NHS3 518 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 MPP4Q96JB8 637 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 EPYCQ99645 322 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 TMEM43Q9BTV4 400 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 SLC7A10Q9NS82 523 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 SEC14L4Q9UDX3 406 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 SLC7A8Q9UHI5 535 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 POMPQ9Y244 141 aa13.68□□□□□ -0.22
SKA2-209ENST00000583976 ARFGEF3Q5TH69 2177 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 MALRD1Q5VYJ5 2156 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 OR2T1O43869 369 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 EIF1BO60739 113 aaKnown RBP13.67□□□□□ -0.22
SKA2-209ENST00000583976 IFNA2P01563 188 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 MT-ND1P03886 318 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 FABP3P05413 133 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 FAM157CP0CG43 387 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 UGT2B15P54855 530 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 H3F3AP84243 136 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 TRAM2Q15035 370 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 MTX3Q5HYI7 312 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 TSPO2Q5TGU0 170 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 PAQR6Q6TCH4 344 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 KLHL17Q6TDP4 642 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 C5orf46Q6UWT4 87 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 IL17RELQ6ZVW7 336 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 SPATA24Q86W54 205 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 ZDHHC21Q8IVQ6 265 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 OFCC1Q8IZS5 231 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 ARIH2OSQ8N7S6 290 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 PFN4Q8NHR9 129 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 TMEM239Q8WW34 195 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 RADILQ96JH8 1075 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 TNFRSF13CQ96RJ3 184 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 TRIM15Q9C019 465 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 MGAT4BQ9UQ53 548 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 FLVCR1Q9Y5Y0 555 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 ATP23Q9Y6H3 246 aa13.67□□□□□ -0.22
SKA2-209ENST00000583976 FTCDNL1E5RQL4 147 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 H7C417 338 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 M0R082 166 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 DNPH1O43598 174 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 PIP5K1CO60331 668 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 MRPL33O75394 65 aaKnown RBP13.66□□□□□ -0.22
SKA2-209ENST00000583976 PRSS23O95084 383 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 CH25HO95992 272 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 BGLAPP02818 100 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 IGHV4-31P0DP07 118 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 THRBP10828 461 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 ITGA2P17301 1181 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 RHCEP18577 417 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 GRPRP30550 384 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 LSM11P83369 360 aaKnown RBP eCLIP13.66□□□□□ -0.22
SKA2-209ENST00000583976 LOXL1Q08397 574 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms