RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 IMPA2O14732 288 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 FFAR1O14842 300 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 WIPF1O43516 503 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 SASH3O75995 380 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 VAMP5O95183 116 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 AHSA1O95433 338 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 TGFAP01135 160 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 ASAH2BP0C7U1 165 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 PGA4P0DJD7 388 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 PGA3P0DJD8 388 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 HOXB1P14653 301 aaPredicted RBP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 DAOP14920 347 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 IFNGR1P15260 489 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 ITGA2P17301 1181 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 TCN1P20061 433 aaPredicted RBP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 NPR2P20594 1047 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 WNT5AP41221 380 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 ALDH3B1P43353 468 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 MAGEB1P43366 347 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 GIPRP48546 466 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 GZMKP49863 264 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 PDLIM4P50479 330 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF133P52736 654 aaPredicted RBP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 MTPNP58546 118 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 TGFBR3Q03167 851 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 FADDQ13158 208 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 SNTB2Q13425 540 aaKnown RBP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 CCNIQ14094 377 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 SCARB2Q14108 478 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 MELKQ14680 651 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 RAB39AQ14964 217 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF74Q16587 644 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 ALG10BQ5I7T1 473 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 C6orf10Q5SRN2 563 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 ARMC4Q5T2S8 1044 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 GCNT6Q5T4J0 391 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 C1QTNF12Q5T7M4 302 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 HHATQ5VTY9 493 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 FAM91A1Q658Y4 838 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 NXNQ6DKJ4 435 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 REEP3Q6NUK4 255 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 SPATA21Q7Z572 469 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 MEX3DQ86XN8 651 aaKnown RBP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 NKAIN4Q8IVV8 208 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 HOMEZQ8IX15 550 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF101Q8IZC7 436 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 MIER2Q8N344 545 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 DPP10Q8N608 796 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 TRIML2Q8N7C3 387 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 SMYD1Q8NB12 490 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 OR6S1Q8NH40 331 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 BBS10Q8TAM1 723 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 CKAP2Q8WWK9 683 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 TAF15Q92804 592 aaKnown RBP eCLIP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 SPDL1Q96EA4 605 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 THOC1Q96FV9 657 aaKnown RBP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 LRR1Q96L50 414 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 C1orf147Q96MC9 270 aaPredicted RBP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF317Q96PQ6 595 aaPredicted RBP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 SNX18Q96RF0 628 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 SH3GL3Q99963 347 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 VRK1Q99986 396 aaPredicted RBP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 SYT3Q9BQG1 590 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 TMEM43Q9BTV4 400 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF416Q9BWM5 594 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 BEX2Q9BXY8 128 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 PCDHAC1Q9H158 963 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 CENPHQ9H3R5 247 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 POFUT1Q9H488 388 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 KAT8Q9H7Z6 458 aaKnown RBP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 FKRPQ9H9S5 495 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 ESM1Q9NQ30 184 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 TCF7L2Q9NQB0 619 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 G6PC2Q9NQR9 355 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 MAN2C1Q9NTJ4 1040 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 TMEM38BQ9NVV0 291 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 CCDC167Q9P0B6 97 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 PRDM4Q9UKN5 801 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 SNX13Q9Y5W8 968 aa3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 SOX21Q9Y651 276 aaPredicted RBP3.8□□□□□ -1.8
PPP4R1-209ENST00000578329 NOTCH1P46531 2555 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 SH3PXD2BA1X283 911 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 OR6C65A6NJZ3 312 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 AIM2O14862 343 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 PIP5K1CO60331 668 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 SHOX2O60902 331 aaPredicted RBP3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 PRSS23O95084 383 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 CH25HO95992 272 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 WNT11O96014 354 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 CRYAAP02489 173 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 TP53P04637 393 aaPredicted RBP3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 CSF3P09919 207 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 NAT2P11245 290 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 APEHP13798 732 aaKnown RBP3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF250P15622 560 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF43P17038 809 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 EGR1P18146 543 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 SRD5A1P18405 259 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 NCF2P19878 526 aaPredicted RBP3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 GLRXP35754 106 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms