RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SLC43A1O75387 559 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 SOX14O95416 240 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 TP53P04637 393 aaPredicted RBP15.13■□□□□ 0.01
NUP88-210ENST00000574867 NTF4P34130 210 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 SELENOPP49908 381 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 TOP3AQ13472 1001 aaPredicted RBP15.13■□□□□ 0.01
NUP88-210ENST00000574867 RIPK1Q13546 671 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 MELKQ14680 651 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 TRIP10Q15642 601 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 SLC36A3Q495N2 470 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 CLEC18BQ6UXF7 455 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 TMEM123Q8N131 208 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 POMGNT2Q8NAT1 580 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 CLEC18CQ8NCF0 446 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 SLC25A44Q96H78 314 aaPredicted RBP15.13■□□□□ 0.01
NUP88-210ENST00000574867 TXNDC15Q96J42 360 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 TSPAN32Q96QS1 320 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 IFT27Q9BW83 186 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 PLA2G12AQ9BZM1 189 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 JKAMPQ9P055 326 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 GRHPRQ9UBQ7 328 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 IL20RAQ9UHF4 553 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 PCNX1Q96RV3 2341 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 WIPF3A6NGB9 483 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 A6NIZ1 184 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 H3BN98 237 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 EI24O14681 340 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ALPLP05186 524 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 SDHAP31040 664 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ASCL1P50553 236 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ALDH3A2P51648 485 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 RAP1BP61224 184 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 RAP1AP62834 184 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ERVK-25P63136 954 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 DAG1Q14118 895 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ARMC4Q5T2S8 1044 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 FAM122BQ7Z309 247 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 CBR4Q8N4T8 237 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ZNF570Q96NI8 536 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 EMC6Q9BV81 110 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 LINC00470Q9BZP3 86 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ENKD1Q9H0I2 346 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 C8orf4Q9NR00 106 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 MALT1Q9UDY8 824 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 BAIAP2Q9UQB8 552 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ADAM18Q9Y3Q7 739 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ORC6Q9Y5N6 252 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 IMPA2O14732 288 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ARPC3O15145 178 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 CLDN14O95500 239 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 IGHG1P01857 330 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ESRRGP62508 458 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ANKRD34AQ69YU3 496 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ZBTB49Q6ZSB9 765 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 BEND4Q6ZU67 534 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 OR2T33Q8NG76 320 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 OR8D4Q8NGM9 314 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ZNF519Q8TB69 540 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 ZNF566Q969W8 418 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 LRR1Q96L50 414 aa15.12■□□□□ 0.01
NUP88-210ENST00000574867 OPN3Q9H1Y3 402 aaPredicted RBP15.12■□□□□ 0.01
NUP88-210ENST00000574867 TMEFF2Q9UIK5 374 aaPredicted RBP15.12■□□□□ 0.01
NUP88-210ENST00000574867 ZNF346Q9UL40 294 aaKnown RBP15.12■□□□□ 0.01
NUP88-210ENST00000574867 FAM90A27PA6NNH2 459 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 CASQ2O14958 399 aaPredicted RBP15.11■□□□□ 0.01
NUP88-210ENST00000574867 IDH3BO43837 385 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 PPP1R3DO95685 299 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 TXNDC12O95881 172 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 NR2C1P13056 603 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 CDH2P19022 906 aaPredicted RBP15.11■□□□□ 0.01
NUP88-210ENST00000574867 SLC34A1Q06495 639 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 CLEC12AQ5QGZ9 265 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 FBXW9Q5XUX1 488 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 Q6ZT83 130 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 ABHD12BQ7Z5M8 362 aaPredicted RBP15.11■□□□□ 0.01
NUP88-210ENST00000574867 ADCK1Q86TW2 530 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 ARIH2OSQ8N7S6 290 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 MAGEE2Q8TD90 523 aaPredicted RBP15.11■□□□□ 0.01
NUP88-210ENST00000574867 SSC4DQ8WTU2 575 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 LRRC46Q96FV0 321 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 TSSK6Q9BXA6 273 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 IER3IP1Q9Y5U9 82 aa15.11■□□□□ 0.01
NUP88-210ENST00000574867 A8MXE2 369 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 BHLHE40O14503 412 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 XKRYO14609 159 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 ACADSP16219 412 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 EDNRAP25101 427 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 ACVR1BP36896 505 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 SRSF1Q07955 248 aaKnown RBP eCLIP15.1■□□□□ 0.01
NUP88-210ENST00000574867 CAMK2DQ13557 499 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 FBXL19-AS1Q494R0 122 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.1■□□□□ 0.01
NUP88-210ENST00000574867 LUZP2Q86TE4 346 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 UBE2J2Q8N2K1 259 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 ZNF610Q8N9Z0 462 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 NOXO1Q8NFA2 376 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 ERMAPQ96PL5 475 aaPredicted RBP15.1■□□□□ 0.01
NUP88-210ENST00000574867 KCNJ16Q9NPI9 418 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 B3GAT2Q9NPZ5 323 aa15.1■□□□□ 0.01
NUP88-210ENST00000574867 UPB1Q9UBR1 384 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms