RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 TMEM5Q9Y2B1 443 aa9.42□□□□□ -0.9
LITAF-216ENST00000574848 SLC35A3Q9Y2D2 325 aa9.42□□□□□ -0.9
LITAF-216ENST00000574848 PLEKHA6Q9Y2H5 1048 aa9.42□□□□□ -0.9
LITAF-216ENST00000574848 PCDHGB1Q9Y5G3 927 aa9.42□□□□□ -0.9
LITAF-216ENST00000574848 ITPR3Q14573 2671 aa9.42□□□□□ -0.9
LITAF-216ENST00000574848 PLGP00747 810 aaPredicted RBP9.41□□□□□ -0.9
LITAF-216ENST00000574848 CSTAP01040 98 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 PSMB1P20618 241 aaKnown RBP9.41□□□□□ -0.9
LITAF-216ENST00000574848 POU1F1P28069 291 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 LOXP28300 417 aaPredicted RBP9.41□□□□□ -0.9
LITAF-216ENST00000574848 FMO3P31513 532 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 SFTPDP35247 375 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 RNF144AP50876 292 aaPredicted RBP9.41□□□□□ -0.9
LITAF-216ENST00000574848 CTBP2P56545 445 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 CARD18P57730 90 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 SLC35A2P78381 396 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 TSPAN31Q12999 210 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 SEC23BQ15437 767 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 NEDD8Q15843 81 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 MAPK14Q16539 360 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 SLX4IPQ5VYV7 408 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 GTF2IRD2BQ6EKJ0 949 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 RPL13AP3Q6NVV1 102 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 PTCHD4Q6ZW05 846 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 OLIG3Q7RTU3 272 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 PRSS48Q7RTY5 328 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 GTF2IRD2Q86UP8 949 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 CDK20Q8IZL9 346 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 SPARTQ8N0X7 666 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 TMCO5AQ8N6Q1 288 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 OR8J1Q8NGP2 316 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 RHOXF1Q8NHV9 184 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 SLC25A43Q8WUT9 341 aaPredicted RBP9.41□□□□□ -0.9
LITAF-216ENST00000574848 HS6ST2Q96MM7 605 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 SLC38A2Q96QD8 506 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 MED18Q9BUE0 208 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 TRIM2Q9C040 744 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 RBM38Q9H0Z9 239 aaKnown RBP9.41□□□□□ -0.9
LITAF-216ENST00000574848 DUSP21Q9H596 190 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 BCO1Q9HAY6 547 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 MAN2C1Q9NTJ4 1040 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 SELENONQ9NZV5 590 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 CLEC4AQ9UMR7 237 aa9.41□□□□□ -0.9
LITAF-216ENST00000574848 IRGMA1A4Y4 181 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 EFCAB10A6NFE3 127 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 PTGES3LE9PB15 166 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 CASKO14936 926 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 TPST2O60704 377 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 OPN1LWP04000 364 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 CD53P19397 219 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 PGCP20142 388 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 FPR3P25089 353 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 EPHA2P29317 976 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 GSTT1P30711 240 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 CCR4P51679 360 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 RIPPLY3P57055 190 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 RAC3P60763 192 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 SNRPGP62308 76 aaKnown RBP9.4□□□□□ -0.9
LITAF-216ENST00000574848 RAB39AQ14964 217 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 DEFB113Q30KQ7 82 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 MEDAGQ5VYS4 303 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 TFAP2EQ6VUC0 442 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 STAC2Q6ZMT1 411 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 RASSF6Q6ZTQ3 369 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 BEND4Q6ZU67 534 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 MBOAT2Q6ZWT7 520 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 FCRLAQ7L513 359 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 HMGN2P46Q86SG4 172 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 COMTD1Q86VU5 262 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 TGIF2LYQ8IUE0 185 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 CLVS1Q8IUQ0 354 aaPredicted RBP9.4□□□□□ -0.9
LITAF-216ENST00000574848 SLC43A2Q8N370 569 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 CLIP4Q8N3C7 705 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 ABHD3Q8WU67 409 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 TMEM234Q8WY98 164 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 RORBQ92753 470 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 ZG16BQ96DA0 208 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 MPP4Q96JB8 637 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 BCL7BQ9BQE9 202 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 FANCFQ9NPI8 374 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 CNOT2Q9NZN8 540 aaKnown RBP9.4□□□□□ -0.9
LITAF-216ENST00000574848 RPS6KB2Q9UBS0 482 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 REV1Q9UBZ9 1251 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 ING1Q9UK53 422 aaPredicted RBP9.4□□□□□ -0.9
LITAF-216ENST00000574848 SLC7A7Q9UM01 511 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 CEPT1Q9Y6K0 416 aa9.4□□□□□ -0.9
LITAF-216ENST00000574848 ZNF469Q96JG9 3925 aaPredicted RBP9.39□□□□□ -0.91
LITAF-216ENST00000574848 A0A087WUU8 490 aa9.39□□□□□ -0.91
LITAF-216ENST00000574848 HTR3EA5X5Y0 456 aa9.39□□□□□ -0.91
LITAF-216ENST00000574848 ZNF99A8MXY4 864 aaPredicted RBP9.39□□□□□ -0.91
LITAF-216ENST00000574848 M0R3G1 203 aa9.39□□□□□ -0.91
LITAF-216ENST00000574848 SMAD9O15198 467 aaKnown RBP9.39□□□□□ -0.91
LITAF-216ENST00000574848 FRS3O43559 492 aa9.39□□□□□ -0.91
LITAF-216ENST00000574848 XPNPEP2O43895 674 aa9.39□□□□□ -0.91
LITAF-216ENST00000574848 BCAS1O75363 584 aaPredicted RBP9.39□□□□□ -0.91
LITAF-216ENST00000574848 THBDP07204 575 aa9.39□□□□□ -0.91
LITAF-216ENST00000574848 DCKP27707 260 aa9.39□□□□□ -0.91
LITAF-216ENST00000574848 RBM34P42696 430 aaKnown RBP9.39□□□□□ -0.91
LITAF-216ENST00000574848 GSSP48637 474 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms