RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 RNF220Q5VTB9 566 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 AP1ARQ63HQ0 302 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 SLC22A25Q6T423 547 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 PAQR6Q6TCH4 344 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 KLHL17Q6TDP4 642 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 KLHL24Q6TFL4 600 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 TMEM108Q6UXF1 575 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 P2RY8Q86VZ1 359 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 CYP4Z1Q86W10 505 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 KRT73Q86Y46 540 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 LILRB1Q8NHL6 650 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 NFKBIDQ8NI38 313 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 BBS10Q8TAM1 723 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 SLC38A5Q8WUX1 472 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 HS6ST2Q96MM7 605 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 ZNF607Q96SK3 696 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 TSC22D3Q99576 134 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 SPATA5L1Q9BVQ7 753 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 A4GALTQ9NPC4 353 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 UBAP1Q9NZ09 502 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 CISD1Q9NZ45 108 aaKnown RBP8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 NPAP1Q9NZP6 1156 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 RPS6KB2Q9UBS0 482 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 MALT1Q9UDY8 824 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 IFT52Q9Y366 437 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 SAMHD1Q9Y3Z3 626 aaKnown RBP8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 FAM32AQ9Y421 112 aaKnown RBP8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 MAGED1Q9Y5V3 778 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 FLVCR1Q9Y5Y0 555 aa8.51□□□□□ -1.05
NPLOC4-216ENST00000574344 TLN2Q9Y4G6 2542 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 A8MVM7 634 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 hCG_2039718K7EN88 272 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 FRS3O43559 492 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 PGM3O95394 542 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 AHSA1O95433 338 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 SNAP29O95721 258 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 LY6G6DO95868 133 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 IFNW1P05000 195 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 NUDT7P0C024 238 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 TFPTP0C1Z6 253 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 SMIM18P0DKX4 95 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 PRG2P13727 222 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 AQP1P29972 269 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 ACAA2P42765 397 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 PPP2R2BQ00005 443 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 TGFBR3Q03167 851 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 TOP3AQ13472 1001 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 APOFQ13790 326 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 SLC17A1Q14916 467 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 CLEC12BQ2HXU8 276 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 RBM48Q5RL73 367 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 PRAMEF8Q5VWM4 474 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 PRAMEF7Q5VXH5 474 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 TMEM225Q6GV28 225 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 OR7E24Q6IFN5 339 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 REEP3Q6NUK4 255 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 SEZ6L2Q6UXD5 910 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 CCDC80Q76M96 950 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 AAED1Q7RTV5 226 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 PIWIL3Q7Z3Z3 882 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 ARMC8Q8IUR7 673 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 DEPDC4Q8N2C3 294 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 CLIP4Q8N3C7 705 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 TMEM99Q8N816 258 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 OR9K2Q8NGE7 335 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 RNF217Q8TC41 542 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 IGFBPL1Q8WX77 278 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 MAL2Q969L2 176 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 EPYCQ99645 322 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 APOL4Q9BPW4 351 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 C1QTNF6Q9BXI9 259 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 TRIM2Q9C040 744 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 GRIP2Q9C0E4 1043 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 YIPF3Q9GZM5 350 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 ADAM19Q9H013 955 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 TOR3AQ9H497 397 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 NTN4Q9HB63 628 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 ZNF701Q9NV72 531 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 MGAT4BQ9UQ53 548 aa8.5□□□□□ -1.05
NPLOC4-216ENST00000574344 CHD3Q12873 2000 aaKnown RBP8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 LIPT2A6NK58 231 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 AQP7P3A6NL99 342 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 ELOA3DA6NLF2 546 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 SHISA9B4DS77 424 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 SERPINB7O75635 380 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 SEMG1P04279 462 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 ITGA5P08648 1049 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 DANCRP0C864 163 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 PAX1P15863 534 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 PTAFRP25105 342 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 PCSK6P29122 969 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 TTKP33981 857 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 NTF4P34130 210 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 FOXG1P55316 489 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 GABARAPL2P60520 117 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 SELENOWP63302 87 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 H3F3AP84243 136 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 HOXC5Q00444 222 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 IL1RL1Q01638 556 aa8.49□□□□□ -1.05
NPLOC4-216ENST00000574344 SPIBQ01892 262 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms