RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 C10orf53Q8N6V4 93 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 LRRC75AQ8NAA5 344 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 LSM14AQ8ND56 463 aaKnown RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 OR5M1Q8NGP8 315 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 OR8K3Q8NH51 312 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 G6PC3Q9BUM1 346 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 A0A0A6YYC8 382 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 MFSD2BA6NFX1 497 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 I3L1I5 382 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 F13BP05160 661 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 HOXD4P09016 255 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 RPS27P42677 84 aaKnown RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 GRK6P43250 576 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 SLC25A1P53007 311 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 CTXN1P60606 82 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 PCGF3Q3KNV8 242 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 ALPK2Q86TB3 2170 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 OR51A4Q8NGJ6 313 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 PHOSPHO2Q8TCD6 241 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 SIPA1Q96FS4 1042 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 OR10H1Q9Y4A9 318 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 ANXA2P2A6NMY6 339 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 HIST1H2ABP04908 130 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 ANXA2P07355 339 aaKnown RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 CD14P08571 375 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 MAPK3P27361 379 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 H2BFSP57053 126 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 SEC61A1P61619 476 aaKnown RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 ODF4Q2M2E3 257 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 RGS7BPQ6MZT1 257 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 HIST3H2AQ7L7L0 130 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 CDC20BQ86Y33 519 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 OR4D10Q8NGI6 311 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 OR4C16Q8NGL9 310 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 ZDHHC1Q8WTX9 485 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 HIST1H2ACQ93077 130 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 LMF1Q96S06 567 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 ELOA3DA6NLF2 546 aaPredicted RBP17.33■□□□□ 0.36
SCARF1-206ENST00000573852 OR4C45A6NMZ5 311 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 OIP5O43482 229 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 NMBP08949 121 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 UBE2MP61081 183 aaKnown RBP17.33■□□□□ 0.36
SCARF1-206ENST00000573852 BTG2P78543 158 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF74Q16587 644 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ELOA3BQ3SY89 546 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ARHGEF39Q8N4T4 335 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ELOA3Q8NG57 546 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 C16orf52Q8NHV5 167 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 KLHL15Q96M94 604 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 SLC19A3Q9BZV2 496 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 TCEAL2Q9H3H9 227 aaPredicted RBP17.33■□□□□ 0.36
SCARF1-206ENST00000573852 C12orf10Q9HB07 376 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 IKZF2Q9UKS7 526 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 HIF3AQ9Y2N7 669 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 POM121CA8CG34 1229 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 H7C417 338 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ARPC5O15511 151 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 XRCC3O43542 346 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 RBBP9O75884 186 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 KLF8O95600 359 aaPredicted RBP17.33■□□□□ 0.36
SCARF1-206ENST00000573852 CA3P07451 260 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ST6GAL1P15907 406 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 EFNB2P52799 333 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 PSMD4P55036 377 aaKnown RBP17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ALG10Q5BKT4 473 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ALKAL2Q6UX46 152 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF595Q8IYB9 648 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 C15orf40Q8WUR7 153 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 HERVK_113Q902F9 699 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 PNPLA2Q96AD5 504 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 GINS4Q9BRT9 223 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ULBP3Q9BZM4 244 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 IGFLR1Q9H665 355 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 MTFP1Q9UDX5 166 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 OPN4Q9UHM6 478 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ERVK-19Q9WJR5 959 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 ATG2AQ2TAZ0 1938 aa17.33■□□□□ 0.36
SCARF1-206ENST00000573852 RANBP2P49792 3224 aaKnown RBP17.32■□□□□ 0.36
SCARF1-206ENST00000573852 CACNA1CQ13936 2221 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 TRBV5-7A0A0A0MS05 114 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 TNFRSF10CO14798 259 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 PROS1P07225 676 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 S100A11P31949 105 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 GPR3P46089 330 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 MAT1AQ00266 395 aaKnown RBP17.32■□□□□ 0.36
SCARF1-206ENST00000573852 YOD1Q5VVQ6 348 aaPredicted RBP17.32■□□□□ 0.36
SCARF1-206ENST00000573852 LRRN1Q6UXK5 716 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 OR2G2Q8NGZ5 317 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 COQ8AQ8NI60 647 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 TMEM106AQ96A25 262 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 MOKQ9UQ07 419 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 GPANK1O95872 356 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 CELA2BP08218 269 aaPredicted RBP17.32■□□□□ 0.36
SCARF1-206ENST00000573852 ZP3P21754 424 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 HNRNPA2B1P22626 353 aaKnown RBP17.32■□□□□ 0.36
SCARF1-206ENST00000573852 SDHAP31040 664 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 DLX5P56178 289 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 GUCA2AQ02747 115 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 RIPPLY1Q0D2K3 151 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 KCNAB1Q14722 419 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms