RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 LOC102725191A0A1B0GVB3 256 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 TMEM72A0PK05 275 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 SOCS6O14544 535 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 ZNF208O43345 1280 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 CDRT1O95170 752 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 EIF2S3P41091 472 aaKnown RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 FRKP42685 505 aaPredicted RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 SCRN3Q0VDG4 424 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 SEC23BQ15437 767 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 RNASE12Q5GAN4 147 aaKnown RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 FAM131AQ6UXB0 335 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 ESPNLQ6ZVH7 1005 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 ASCL5Q7RTU5 278 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 BCDIN3DQ7Z5W3 292 aaKnown RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 TMEM179BQ7Z7N9 219 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 ZNF687Q8N1G0 1237 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 UBE2FQ969M7 185 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 GIMAP5Q96F15 307 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 DUS3LQ96G46 650 aaKnown RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 ARL5BQ96KC2 179 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 FAM71F1Q96KD3 344 aaPredicted RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 MOKQ9UQ07 419 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 C21orf33P30042 268 aaPredicted RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 PSMB10P40306 273 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 OPRL1P41146 370 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 DIO1P49895 249 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 WNT4P56705 351 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 GABARAPL2P60520 117 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 CD300CQ08708 224 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 TOMM34Q15785 309 aaPredicted RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 HEPHL1Q6MZM0 1159 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 C11orf88Q6PI97 169 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 PPP1R32Q7Z5V6 425 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 SLC43A2Q8N370 569 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 ARIH2OSQ8N7S6 290 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 SUMF1Q8NBK3 374 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 CPNE4Q96A23 557 aaPredicted RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 BARD1Q99728 777 aaKnown RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 VNN3Q9NY84 501 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 ZNF346Q9UL40 294 aaKnown RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 SLC7A11Q9UPY5 501 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 SPEF1Q9Y4P9 236 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 OR2M5A3KFT3 312 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 SLC22A1O15245 554 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 TBX6O95947 436 aaPredicted RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 LCKP06239 509 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 HTR5AP47898 357 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 TMPRSS3P57727 454 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 RIN1Q13671 783 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 PCOLCEQ15113 449 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 HSD17B12Q53GQ0 312 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 ACSM5Q6NUN0 579 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 PLET1Q6UQ28 207 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 TIPARPQ7Z3E1 657 aaKnown RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 MS4A15Q8N5U1 240 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 PRSS33Q8NF86 280 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 NEIL3Q8TAT5 605 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 ADAMTS14Q8WXS8 1223 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 CPNE2Q96FN4 548 aaPredicted RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 OXGR1Q96P68 337 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 FUNDC2Q9BWH2 189 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 RBM38Q9H0Z9 239 aaKnown RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 C1orf198Q9H425 327 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 CCNKO75909 580 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 COX6A1P12074 109 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 PTGS2P35354 604 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 CD97P48960 835 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 RORCP51449 518 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 PRKCDQ05655 676 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 IL18Q14116 193 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 NXNL2Q5VZ03 156 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 MRPL21Q7Z2W9 205 aaKnown RBP9.15□□□□□ -0.94
SMG6-213ENST00000573166 LINC00346Q8IVM7 164 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 C17orf47Q8NEP4 570 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 C11orf24Q96F05 449 aaPredicted RBP9.15□□□□□ -0.94
SMG6-213ENST00000573166 NGBQ9NPG2 151 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 TMEM269A0A1B0GVZ9 245 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 A0A1W2PQD3 144 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 FUOMA2VDF0 154 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 SYT7O43581 403 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 PRKYO43930 277 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 MTRF1O75570 445 aaKnown RBP9.15□□□□□ -0.94
SMG6-213ENST00000573166 TSPAN9O75954 239 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 PLATP00750 562 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 HIST1H1CP16403 213 aaKnown RBP9.15□□□□□ -0.94
SMG6-213ENST00000573166 AZGP1P25311 298 aaKnown RBP9.15□□□□□ -0.94
SMG6-213ENST00000573166 PTPN6P29350 595 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 NCS1P62166 190 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 RAC1P63000 192 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 FAPQ12884 760 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 KRT74Q7RTS7 529 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 CDH24Q86UP0 819 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 OR5AK2Q8NH90 309 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 MFSD8Q8NHS3 518 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 TMEM43Q9BTV4 400 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 ELOVL3Q9HB03 270 aa9.15□□□□□ -0.94
SMG6-213ENST00000573166 COA3Q9Y2R0 106 aaPredicted RBP9.15□□□□□ -0.94
SMG6-213ENST00000573166 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 CD8B2A6NJW9 211 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms