RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 SIGLEC7Q9Y286 467 aa6.13□□□□□ -1.43
SMG6-209ENST00000571442 HIF3AQ9Y2N7 669 aa6.13□□□□□ -1.43
SMG6-209ENST00000571442 LYVE1Q9Y5Y7 322 aa6.13□□□□□ -1.43
SMG6-209ENST00000571442 SLC25A15Q9Y619 301 aa6.13□□□□□ -1.43
SMG6-209ENST00000571442 A0A096LPE4 126 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 A0A1W2PPZ6 126 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 DHRS12A0PJE2 317 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 DPRXA6NFQ7 191 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 OR5H1A6NKK0 313 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 AQP12BA6NM10 295 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 EFCAB9A8MZ26 197 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 M0R3G1 203 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 PDZD2O15018 2839 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 SLC43A1O75387 559 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 TRMUO75648 421 aaKnown RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 IGFBP1P08833 259 aaPredicted RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 ROS1P08922 2347 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 PGA4P0DJD7 388 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 PGA3P0DJD8 388 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 SAGP10523 405 aaPredicted RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 IL32P24001 234 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 MPGP29372 298 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 HMGA2P52926 109 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 ARF1P84077 181 aaKnown RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 MYBPC1Q00872 1141 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 ROR2Q01974 943 aaKnown RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 SPOCK1Q08629 439 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 TOP3AQ13472 1001 aaPredicted RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 CCNIQ14094 377 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 FLOT2Q14254 428 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 P2RY6Q15077 328 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 STK11Q15831 433 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 CEACAM16Q2WEN9 425 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 TBRG1Q3YBR2 411 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 ALG10Q5BKT4 473 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 MTX3Q5HYI7 312 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 ZNF770Q6IQ21 691 aaPredicted RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 PGBD2Q6P3X8 592 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 LRFN4Q6PJG9 635 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 MYPOPQ86VE0 399 aaPredicted RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 TMEM200AQ86VY9 491 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 CYP4Z1Q86W10 505 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 SPATA24Q86W54 205 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 CDC20BQ86Y33 519 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 AQP12AQ8IXF9 295 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 RNF113BQ8IZP6 322 aaKnown RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 HS3ST5Q8IZT8 346 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 ANKK1Q8NFD2 765 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 OR1K1Q8NGR3 316 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 OR6X1Q8NH79 312 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 FGFBP3Q8TAT2 258 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 ZNF519Q8TB69 540 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 BCL2L2Q92843 193 aaPredicted RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 NEUROG1Q92886 237 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 TMEM54Q969K7 222 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 MCUR1Q96AQ8 359 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 NMD3Q96D46 503 aaKnown RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 PIK3IP1Q96FE7 263 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 LRRC46Q96FV0 321 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 SPG11Q96JI7 2443 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 LURAP1Q96LR2 239 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 ALPK1Q96QP1 1244 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 TSPAN32Q96QS1 320 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 ZNF347Q96SE7 839 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 CHID1Q9BWS9 393 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 C1QTNF6Q9BXI9 259 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 MRPL13Q9BYD1 178 aaKnown RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 SETD2Q9BYW2 2564 aaPredicted RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 OR10A4Q9H209 315 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 MAGIXQ9H6Y5 334 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 PLEKHF2Q9H8W4 249 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 SEC61A2Q9H9S3 476 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 NOX3Q9HBY0 568 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 INIPQ9NRY2 104 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 PARPBPQ9NWS1 579 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 TAS2R16Q9NYV7 291 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 ZNF224Q9NZL3 707 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 UPB1Q9UBR1 384 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 ZNF346Q9UL40 294 aaKnown RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 AURKCQ9UQB9 309 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 ADAM18Q9Y3Q7 739 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 FAM32AQ9Y421 112 aaKnown RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 NOX1Q9Y5S8 564 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 MAGED1Q9Y5V3 778 aaPredicted RBP6.12□□□□□ -1.43
SMG6-209ENST00000571442 U3KQV3 271 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 HIVEP1P15822 2718 aa6.12□□□□□ -1.43
SMG6-209ENST00000571442 CIB4A0PJX0 185 aa6.11□□□□□ -1.43
SMG6-209ENST00000571442 ZNF587BE7ETH6 402 aa6.11□□□□□ -1.43
SMG6-209ENST00000571442 RPL36A-HNRNPH2H7BZ11 118 aa6.11□□□□□ -1.43
SMG6-209ENST00000571442 H7C1C5 153 aa6.11□□□□□ -1.43
SMG6-209ENST00000571442 TNFRSF11BO00300 401 aa6.11□□□□□ -1.43
SMG6-209ENST00000571442 FKBP6O75344 327 aa6.11□□□□□ -1.43
SMG6-209ENST00000571442 OR6A2O95222 327 aa6.11□□□□□ -1.43
SMG6-209ENST00000571442 SLC2A10O95528 541 aa6.11□□□□□ -1.43
SMG6-209ENST00000571442 BCL10O95999 233 aa6.11□□□□□ -1.43
SMG6-209ENST00000571442 GASTP01350 101 aa6.11□□□□□ -1.43
SMG6-209ENST00000571442 IGHMP01871 453 aa6.11□□□□□ -1.43
SMG6-209ENST00000571442 TP53P04637 393 aaPredicted RBP6.11□□□□□ -1.43
SMG6-209ENST00000571442 HIST1H2ABP04908 130 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms