RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 AGTP01019 485 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 IGLV3-25P01717 112 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 S100A9P06702 114 aaKnown RBP2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 LYNP07948 512 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 SLC2A3P11169 496 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 RALBP11234 206 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 CTNNA2P26232 953 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR1E1P30953 314 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 MMP12P39900 470 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 MAGEA1P43355 309 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 GNPDA1P46926 289 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 HTR5AP47898 357 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 CDH4P55283 916 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 SNRPFP62306 86 aaKnown RBP2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 HERVK_113P63132 956 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 ERVK-8P63133 956 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 CSNK2BP67870 215 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 C3AR1Q16581 482 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 TCHHL1Q5QJ38 904 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 CARD17Q5XLA6 110 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 ATL3Q6DD88 541 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 FAAP20Q6NZ36 180 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 DOK6Q6PKX4 331 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 Q6ZRG5 221 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 FAM183BPQ6ZVS7 135 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 C17orf64Q86WR6 236 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 DRAXINQ8NBI3 349 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 SLC37A3Q8NCC5 494 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 LINC00301Q8NCQ3 95 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR5AU1Q8NGC0 362 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR13C3Q8NGS6 347 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 NANPQ8TBE9 248 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 CXorf40AQ8TE69 158 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNRF4Q8WWF5 429 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 COQ2Q96H96 371 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 PPP1R16AQ96I34 528 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 AGAP3Q96P47 875 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 CATSPER2Q96P56 530 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 BPIFA3Q9BQP9 254 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 RAB11FIP5Q9BXF6 653 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 ERVK-6Q9BXR3 956 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 RHOJQ9H4E5 214 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 EXO5Q9H790 373 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 VIPAS39Q9H9C1 493 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 C3orf14Q9HBI5 128 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 POPDC2Q9HBU9 364 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 S100A14Q9HCY8 104 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 ASF1BQ9NVP2 202 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 SMOXQ9NWM0 555 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 SPATA7Q9P0W8 599 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 PRDM4Q9UKN5 801 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 EMCNQ9ULC0 261 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 PPP1R3CQ9UQK1 317 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 HS3ST2Q9Y278 367 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 NTNG1Q9Y2I2 539 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 SLC6A5Q9Y345 797 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 FKBP7Q9Y680 259 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 DOPEY1Q5JWR5 2465 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 CSMD2Q7Z408 3487 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 APCP25054 2843 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 A0A087WUV0 522 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 A0A087WZ39 114 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 PPIAL4CA0A0B4J2A2 164 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 FAM240BA0A1B0GVZ2 78 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 PVALEFA0A1B0GWK0 134 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 HEATR9A2RTY3 570 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 PCP4L1A6NKN8 68 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 C15orf61A6NNL5 157 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 SUPT3HB4E1H0 165 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 IMPA2O14732 288 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 POLR1CO15160 346 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 AKR7A2O43488 359 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 LRCH4O75427 683 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 CLDN11O75508 207 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 NXPH2O95156 264 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 ANP32DO95626 131 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 PNMA6AP0CW24 399 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 PPIAL4GP0DN37 164 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 THRAP10827 490 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 CCNB1P14635 433 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 CD82P27701 267 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 LAP3P28838 519 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 NUP62P37198 522 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 FDFT1P37268 417 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 MAGEA5P43359 124 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 CD151P48509 253 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 GFERP55789 205 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 DSCR10P59022 87 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 SEC61GP60059 68 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 GNA12Q03113 381 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 SRYQ05066 204 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 EIF4EBP2Q13542 120 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 SSX2Q16385 188 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 DUSP5Q16690 384 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 PARP6Q2NL67 630 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 TMEM44Q2T9K0 475 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 ALKBH6Q3KRA9 238 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 FAM182AQ5T1J6 154 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 LRRC66Q68CR7 880 aa2.74□□□□□ -1.97
HMGB1P6-201ENST00000569046 RWDD4Q6NW29 188 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms