RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 SLC29A4Q7RTT9 530 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 ATG4DQ86TL0 474 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-250ENST00000568290 TMPRSS12Q86WS5 348 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 CDC20BQ86Y33 519 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 DND1Q8IYX4 353 aaKnown RBP6.96□□□□□ -1.3
ATXN3-250ENST00000568290 OR4N4Q8N0Y3 316 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 RCBTB1Q8NDN9 531 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 OR6N1Q8NGY5 312 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 CEP76Q8TAP6 659 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 PHOSPHO1Q8TCT1 267 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 STK35Q8TDR2 534 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 TSEN15Q8WW01 171 aaKnown RBP6.96□□□□□ -1.3
ATXN3-250ENST00000568290 OMA1Q96E52 524 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 MRGPRX1Q96LB2 322 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 PTCHD1Q96NR3 888 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 SCGB3A2Q96PL1 93 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 NMNAT3Q96T66 252 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 TIMP4Q99727 224 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 HCAR1Q9BXC0 346 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 PPA2Q9H2U2 334 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 CAPN10Q9HC96 672 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 MYOZ1Q9NP98 299 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-250ENST00000568290 MMP25Q9NPA2 562 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 ZFP64Q9NPA5 681 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 MTFP1Q9UDX5 166 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 MMP17Q9ULZ9 603 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 DHDHQ9UQ10 334 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 NOTCH4Q99466 2003 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 HEATR5BQ9P2D3 2071 aa6.96□□□□□ -1.3
ATXN3-250ENST00000568290 TCF20Q9UGU0 1960 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 CKAP5Q14008 2032 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 SPTY2D1-AS1A0A0U1RR47 76 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 A0A1W2PQF6 199 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 NPIPB13A6NJU9 1138 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 OR6C65A6NJZ3 312 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 NUDT19A8MXV4 375 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 LEUTXA8MZ59 168 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 NPIPB4C9JG80 1138 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 F5H5P2 479 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 I3L521 148 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 SLC17A2O00624 439 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 GLSO94925 669 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 OR2A4O95047 310 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 AHSA1O95433 338 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 WDPCPO95876 746 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 MT-ND4P03905 459 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 PROS1P07225 676 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 ASAH2BP0C7U1 165 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 UBBP0CG47 229 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 UBCP0CG48 685 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 THEGLP0DJG4 465 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 RRASP10301 218 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 S100A11P31949 105 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 PTGER1P34995 402 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 FASLGP48023 281 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 SRP9P49458 86 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 DAP3P51398 398 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 CCR4P51679 360 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 PGDP52209 483 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 POLR2HP52434 150 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 PNLIPRP2P54317 469 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 SUMO3P55854 103 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 CLDN2P57739 230 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 TAS2R20P59543 309 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 GPR85P60893 370 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 RPS27AP62979 156 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 UBA52P62987 128 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 ERVK-25P63136 954 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 EIF5AP63241 154 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 CYCSP99999 105 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 GLO1Q04760 184 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 ELAVL1Q15717 326 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 SGCBQ16585 318 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 ST3GAL2Q16842 350 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 EEF1A1P5Q5VTE0 462 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 LIPNQ5VXI9 398 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 LAMTOR1Q6IAA8 161 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 PWWP2BQ6NUJ5 590 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 FAM199XQ6PEV8 388 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 ZC3H14Q6PJT7 736 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 DNM1P46Q6ZS02 220 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 KMT5CQ86Y97 462 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 IZUMO1Q8IYV9 350 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 ZNF679Q8IYX0 411 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 FRMD1Q8N878 549 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 LSM14AQ8ND56 463 aaKnown RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 OR11H7Q8NGC8 314 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 OR6M1Q8NGM8 313 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 OR6N2Q8NGY6 317 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 SLC37A2Q8TED4 501 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 SCARB1Q8WTV0 552 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 THEM6Q8WUY1 208 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 TNFAIP8L1Q8WVP5 186 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 CCDC74AQ96AQ1 378 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 MMABQ96EY8 250 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-250ENST00000568290 ZNF285Q96NJ3 590 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 OR2A7Q96R45 310 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 SLC38A3Q99624 504 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 CDC6Q99741 560 aa6.95□□□□□ -1.3
ATXN3-250ENST00000568290 PRRT1Q99946 306 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms