RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 SIAH3Q8IW03 269 aa16.74■□□□□ 0.27
COMMD4-213ENST00000565834 OR9Q1Q8NGQ5 310 aa16.74■□□□□ 0.27
COMMD4-213ENST00000565834 ZPLD1Q8TCW7 415 aa16.74■□□□□ 0.27
COMMD4-213ENST00000565834 MYDGFQ969H8 173 aa16.74■□□□□ 0.27
COMMD4-213ENST00000565834 ZNF845Q96IR2 970 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-213ENST00000565834 TIMP4Q99727 224 aa16.74■□□□□ 0.27
COMMD4-213ENST00000565834 FKBP14Q9NWM8 211 aa16.74■□□□□ 0.27
COMMD4-213ENST00000565834 MED29Q9NX70 200 aa16.74■□□□□ 0.27
COMMD4-213ENST00000565834 LUZP4Q9P127 313 aa16.74■□□□□ 0.27
COMMD4-213ENST00000565834 ERVK-18Q9QC07 812 aa16.74■□□□□ 0.27
COMMD4-213ENST00000565834 TNFRSF10DQ9UBN6 386 aa16.74■□□□□ 0.27
COMMD4-213ENST00000565834 H7C1C5 153 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 RGS10O43665 173 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 TRAF3IP2O43734 574 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-213ENST00000565834 CRYABP02511 175 aaKnown RBP16.73■□□□□ 0.27
COMMD4-213ENST00000565834 PIPP12273 146 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-213ENST00000565834 MTNR1AP48039 350 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 SLC16A1P53985 500 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 RPS7P62081 194 aaKnown RBP16.73■□□□□ 0.27
COMMD4-213ENST00000565834 LCN6P62502 163 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 PIGFQ07326 219 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 POU4F3Q15319 338 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 NADK2Q4G0N4 442 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 NHLRC1Q6VVB1 395 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 HDDC2Q7Z4H3 204 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 KDF1Q8NAX2 398 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-213ENST00000565834 PNPLA2Q96AD5 504 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 RNFT2Q96EX2 444 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 CRELD1Q96HD1 420 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 TXNDC15Q96J42 360 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 SNX18Q96RF0 628 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 NMNAT2Q9BZQ4 307 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 CCDC90BQ9GZT6 254 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 RPRD1BQ9NQG5 326 aaKnown RBP16.73■□□□□ 0.27
COMMD4-213ENST00000565834 ATMQ13315 3056 aa16.73■□□□□ 0.27
COMMD4-213ENST00000565834 BOD1L1Q8NFC6 3051 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 A0A1B0GVC2 190 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 PRSS37A4D1T9 235 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 SLC22A31A6NKX4 558 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 NPIPA2E9PIF3 369 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 NPIPA3F8WFD2 350 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 AQP7O14520 342 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 SYNGR4O95473 234 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 CLPTM1O96005 669 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 GYPBP06028 91 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 HTR1AP08908 422 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 CLUP10909 449 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 CPN1P15169 458 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 SLC2A5P22732 501 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 SLC25A1P53007 311 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 BIDP55957 195 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 TUBA4AP68366 448 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 LGALS3BPQ08380 585 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 ST3GAL4Q11206 333 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 C3AR1Q16581 482 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 STX19Q8N4C7 294 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 OR9K2Q8NGE7 335 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 ROBO4Q8WZ75 1007 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 WDYHV1Q96HA8 205 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 SF3B5Q9BWJ5 86 aaKnown RBP16.72■□□□□ 0.27
COMMD4-213ENST00000565834 WARS2Q9UGM6 360 aaKnown RBP16.72■□□□□ 0.27
COMMD4-213ENST00000565834 CAMK2AQ9UQM7 478 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 SNX5Q9Y5X3 404 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 MRPS14O60783 128 aaKnown RBP16.72■□□□□ 0.27
COMMD4-213ENST00000565834 CDK1P06493 297 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 SPI1P17947 270 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 DBPQ10586 325 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-213ENST00000565834 TMED1Q13445 227 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 BLMHQ13867 455 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 SLC17A1Q14916 467 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 KLHL22Q53GT1 634 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 EEF1A1P5Q5VTE0 462 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 ABLIM2Q6H8Q1 611 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 FCRLAQ7L513 359 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 CHMP1BQ7LBR1 199 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 PRSS48Q7RTY5 328 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 SYT4Q9H2B2 425 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 PLSCR2Q9NRY7 297 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 ASB6Q9NWX5 421 aa16.72■□□□□ 0.27
COMMD4-213ENST00000565834 VSX1Q9NZR4 365 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-213ENST00000565834 MCTS1Q9ULC4 181 aaKnown RBP16.72■□□□□ 0.27
COMMD4-213ENST00000565834 DSPP15924 2871 aaKnown RBP16.71■□□□□ 0.27
COMMD4-213ENST00000565834 IRGMA1A4Y4 181 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 CCDC182A6NF36 153 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 TRIM64CA6NLI5 447 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 MT-ND2P03891 347 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 STSP08842 583 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 RUNX1T1Q06455 604 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 RAB40BQ12829 278 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 FAM180AQ6UWF9 173 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 CREB3L2Q70SY1 520 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 PM20D2Q8IYS1 436 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 LGALS12Q96DT0 336 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 TEAD3Q99594 435 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 EMC6Q9BV81 110 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 BATF3Q9NR55 127 aa16.71■□□□□ 0.27
COMMD4-213ENST00000565834 MRPS18AQ9NVS2 196 aaKnown RBP16.71■□□□□ 0.27
COMMD4-213ENST00000565834 SVILO95425 2214 aa16.71■□□□□ 0.26
COMMD4-213ENST00000565834 MAP1BP46821 2468 aaKnown RBP16.7■□□□□ 0.26
COMMD4-213ENST00000565834 CYTIPO60759 359 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms