RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 ZNF584Q8IVC4 421 aa13.66□□□□□ -0.22
CDH11-210ENST00000564770 SCAIQ8N9R8 606 aa13.66□□□□□ -0.22
CDH11-210ENST00000564770 SEMA6DQ8NFY4 1073 aa13.66□□□□□ -0.22
CDH11-210ENST00000564770 YIPF5Q969M3 257 aa13.66□□□□□ -0.22
CDH11-210ENST00000564770 RAD21L1Q9H4I0 556 aa13.66□□□□□ -0.22
CDH11-210ENST00000564770 REV1Q9UBZ9 1251 aa13.66□□□□□ -0.22
CDH11-210ENST00000564770 TRBV5-3A0A0A0MS03 114 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 VSTM5A8MXK1 200 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 SERPINI2O75830 405 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 COL8A2P25067 703 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 GLRXP35754 106 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 RGS8P57771 180 aaPredicted RBP13.65□□□□□ -0.22
CDH11-210ENST00000564770 CDK6Q00534 326 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 PUDPQ08623 228 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 CAMK2DQ13557 499 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 FAM91A1Q658Y4 838 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 ULK3Q6PHR2 472 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 NET1Q7Z628 596 aaPredicted RBP13.65□□□□□ -0.22
CDH11-210ENST00000564770 FUNDC1Q8IVP5 155 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 GOLGA6L1Q8N7Z2 621 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 FGFBP3Q8TAT2 258 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 LRR1Q96L50 414 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 FOXB1Q99853 325 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 ULBP2Q9BZM5 246 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 RACGAP1Q9H0H5 632 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 LPAR2Q9HBW0 351 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 VAPAQ9P0L0 249 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 RAB21Q9UL25 225 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 CORINQ9Y5Q5 1042 aa13.65□□□□□ -0.22
CDH11-210ENST00000564770 B4DSR2 109 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 VENTXO95231 258 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 PATE4P0C8F1 98 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 ACHEP22303 614 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 AQP1P29972 269 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 EVX1P49640 407 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 NCALDP61601 193 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 OR1Q1Q15612 314 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 PAGE3Q5JUK9 113 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 REEP3Q6NUK4 255 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 GLCCI1Q86VQ1 547 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 OR6S1Q8NH40 331 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 RNF217Q8TC41 542 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 SLC47A1Q96FL8 570 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 ASPNQ9BXN1 380 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 METTL17Q9H7H0 456 aaPredicted RBP13.64□□□□□ -0.23
CDH11-210ENST00000564770 SLC52A3Q9NQ40 469 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 ZNF275Q9NSD4 429 aaPredicted RBP13.64□□□□□ -0.23
CDH11-210ENST00000564770 MRPL39Q9NYK5 338 aaKnown RBP13.64□□□□□ -0.23
CDH11-210ENST00000564770 USH1CQ9Y6N9 552 aa13.64□□□□□ -0.23
CDH11-210ENST00000564770 TANC2Q9HCD6 1990 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 PKD1L1Q8TDX9 2849 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 PLPP3O14495 311 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 RP2O75695 350 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 RAB36O95755 333 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 SAGP10523 405 aaPredicted RBP13.63□□□□□ -0.23
CDH11-210ENST00000564770 NAT2P11245 290 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 GPR6P46095 362 aaPredicted RBP13.63□□□□□ -0.23
CDH11-210ENST00000564770 MRPL19P49406 292 aaKnown RBP13.63□□□□□ -0.23
CDH11-210ENST00000564770 CDH12P55289 794 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 RAB1AP62820 205 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 PMS2P3Q13401 168 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 RAB39AQ14964 217 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 TRMT5Q32P41 509 aaKnown RBP13.63□□□□□ -0.23
CDH11-210ENST00000564770 EPGNQ6UW88 154 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 WDR88Q6ZMY6 472 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 PAQR4Q8N4S7 273 aaPredicted RBP13.63□□□□□ -0.23
CDH11-210ENST00000564770 OR6N1Q8NGY5 312 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 TMEM186Q96B77 213 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 EPYCQ99645 322 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 MS4A5Q9H3V2 200 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 B3GAT2Q9NPZ5 323 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 HIF1ANQ9NWT6 349 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 POFUT2Q9Y2G5 429 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 SPEF1Q9Y4P9 236 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 NOX1Q9Y5S8 564 aa13.63□□□□□ -0.23
CDH11-210ENST00000564770 M0R3H8 397 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 UBL3O95164 117 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 MSMBP08118 114 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 AHCYP23526 432 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 CFPP27918 469 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 CSNK1A1P48729 337 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 SLC18A1P54219 525 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 BIDP55957 195 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 MAGOHP61326 146 aaKnown RBP13.62□□□□□ -0.23
CDH11-210ENST00000564770 GALK2Q01415 458 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 SCARB2Q14108 478 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 ALKBH6Q3KRA9 238 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 GKAP1Q5VSY0 366 aaPredicted RBP13.62□□□□□ -0.23
CDH11-210ENST00000564770 DEF8Q6ZN54 512 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 PXKQ7Z7A4 578 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 KRT73Q86Y46 540 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 SKA3Q8IX90 412 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 SPDL1Q96EA4 605 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 TSPAN32Q96QS1 320 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 EBF4Q9BQW3 602 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 TMEM43Q9BTV4 400 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 OCEL1Q9H607 264 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 TREM2Q9NZC2 230 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 CCDC167Q9P0B6 97 aa13.62□□□□□ -0.23
CDH11-210ENST00000564770 SLC7A8Q9UHI5 535 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms