RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 NHLRC1Q6VVB1 395 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 C20orf196Q8IYI0 205 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 C10orf67Q8IYJ2 551 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 OR13C2Q8NGS9 318 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 CCM2LQ9NUG4 571 aaPredicted RBP14.08□□□□□ -0.16
RAB40C-208ENST00000564703 LYVE1Q9Y5Y7 322 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 U3KQV3 271 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 CACNA1DQ01668 2161 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 CDC42EP2O14613 210 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 FKBP6O75344 327 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 GOSR1O95249 250 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 IGHG1P01857 330 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 TSPAN19P0C672 248 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 COX5AP20674 150 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 CSNK1A1P48729 337 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 CLRN1P58418 232 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 MELKQ14680 651 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 ACKR1Q16570 336 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 TIMM23BQ5SRD1 257 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 ZER1Q7Z7L7 766 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 WFDC8Q8IUA0 241 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 ZNF295-AS1Q8N0V1 137 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 TMEM123Q8N131 208 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 MUS81Q96NY9 551 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 ALKBH3Q96Q83 286 aaPredicted RBP14.07□□□□□ -0.16
RAB40C-208ENST00000564703 RAB3IPQ96QF0 476 aaPredicted RBP14.07□□□□□ -0.16
RAB40C-208ENST00000564703 FUZQ9BT04 418 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 TXNIPQ9H3M7 391 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 CRLF2Q9HC73 371 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 GPR35Q9HC97 309 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 GRHPRQ9UBQ7 328 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 POFUT2Q9Y2G5 429 aa14.07□□□□□ -0.16
RAB40C-208ENST00000564703 OR5H1A6NKK0 313 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 A6NNC1 897 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 RPL36A-HNRNPH2H7BZ11 118 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 PTP4A3O75365 173 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 E2F6O75461 281 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 NDUFB2O95178 105 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 ITGA5P08648 1049 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 NR2C1P13056 603 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 ACADSP16219 412 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 CCKARP32238 428 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 SH3BGRP55822 239 aaPredicted RBP14.06□□□□□ -0.16
RAB40C-208ENST00000564703 RPL27P61353 136 aaKnown RBP14.06□□□□□ -0.16
RAB40C-208ENST00000564703 RPS4XP62701 263 aaKnown RBP14.06□□□□□ -0.16
RAB40C-208ENST00000564703 LGALS3BPQ08380 585 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 GABRA6Q16445 453 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 MICAQ29983 383 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 C1QTNF12Q5T7M4 302 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 C1orf94Q6P1W5 598 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 KLHL24Q6TFL4 600 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 TMEM200AQ86VY9 491 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 PAPD5Q8NDF8 572 aaKnown RBP14.06□□□□□ -0.16
RAB40C-208ENST00000564703 C1orf162Q8NEQ5 155 aaPredicted RBP14.06□□□□□ -0.16
RAB40C-208ENST00000564703 RBP7Q96R05 134 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 POLDIP3Q9BY77 421 aaKnown RBP14.06□□□□□ -0.16
RAB40C-208ENST00000564703 ULBP2Q9BZM5 246 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 GLTPQ9NZD2 209 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 ZNF346Q9UL40 294 aaKnown RBP14.06□□□□□ -0.16
RAB40C-208ENST00000564703 SIGLEC7Q9Y286 467 aa14.06□□□□□ -0.16
RAB40C-208ENST00000564703 A6NIZ1 184 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 NPIPB13A6NJU9 1138 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 CENPBD1B2RD01 187 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 NPIPB4C9JG80 1138 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 PDLIM1O00151 329 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 DEAF1O75398 565 aaPredicted RBP14.05□□□□□ -0.16
RAB40C-208ENST00000564703 WNT11O96014 354 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 CRYGSP22914 178 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 FPR3P25089 353 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 ACVR1BP36896 505 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 LIMS1P48059 325 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 FOXG1P55316 489 aaPredicted RBP14.05□□□□□ -0.16
RAB40C-208ENST00000564703 UBE2NP61088 152 aaKnown RBP14.05□□□□□ -0.16
RAB40C-208ENST00000564703 RAP1BP61224 184 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 RAP1AP62834 184 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 ARF1P84077 181 aaKnown RBP14.05□□□□□ -0.16
RAB40C-208ENST00000564703 PPP1R8Q12972 351 aaKnown RBP14.05□□□□□ -0.16
RAB40C-208ENST00000564703 TSPAN31Q12999 210 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 TOP3AQ13472 1001 aaPredicted RBP14.05□□□□□ -0.16
RAB40C-208ENST00000564703 PPA1Q15181 289 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 TAB1Q15750 504 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 CEACAM16Q2WEN9 425 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 FAM205BPQ63HN1 556 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 ANKRD16Q6P6B7 361 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 SMARCD3Q6STE5 483 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 YTHDF3Q7Z739 585 aaKnown RBP14.05□□□□□ -0.16
RAB40C-208ENST00000564703 IGFN1Q86VF2 1251 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 C17orf78Q8N4C9 275 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 OR52N5Q8NH56 324 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 GIPC3Q8TF64 312 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 DNAJB9Q9UBS3 223 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 AP4S1Q9Y587 144 aa14.05□□□□□ -0.16
RAB40C-208ENST00000564703 ANKHD1Q8IWZ3 2542 aaKnown RBP14.04□□□□□ -0.16
RAB40C-208ENST00000564703 XKRYO14609 159 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 ENTPD5O75356 428 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 TRMUO75648 421 aaKnown RBP14.04□□□□□ -0.16
RAB40C-208ENST00000564703 GASTP01350 101 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 CD14P08571 375 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 QDPRP09417 244 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 HOXB1P14653 301 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms