RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 GIPRP48546 466 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 EVX1P49640 407 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 RPS23P62266 143 aaKnown RBP11.18□□□□□ -0.62
SF3B3-202ENST00000562722 RAB1AP62820 205 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 CDK6Q00534 326 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 PUDPQ08623 228 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 MAD2L1BPQ15013 274 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-202ENST00000562722 MS4A18Q3C1V0 323 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 FAM91A1Q658Y4 838 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 REP15Q6BDI9 236 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 REEP3Q6NUK4 255 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 MAVSQ7Z434 540 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-202ENST00000562722 TXNDC15Q96J42 360 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 B3GNT2Q9NY97 397 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 DUSP13Q9UII6 198 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 PRORSD1PA6NEY8 169 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 PPIHO43447 177 aaKnown RBP11.17□□□□□ -0.62
SF3B3-202ENST00000562722 FZD7O75084 574 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 UBL3O95164 117 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 OR6A2O95222 327 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 HPXP02790 462 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 BGLAPP02818 100 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 ARAFP10398 606 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 BMP2P12643 396 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 ZNF35P13682 527 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 ZNF14P17017 642 aaPredicted RBP11.17□□□□□ -0.62
SF3B3-202ENST00000562722 AQP1P29972 269 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 GLRXP35754 106 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 CSNK1A1P48729 337 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 SEC24CP53992 1094 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 SCGB2A2Q13296 93 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 OR1Q1Q15612 314 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 MSMPQ1L6U9 139 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 GLIPR1L2Q4G1C9 344 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 ELFN2Q5R3F8 820 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 DHRS4L2Q6PKH6 230 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 COMTD1Q86VU5 262 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 RANBP3LQ86VV4 465 aaPredicted RBP11.17□□□□□ -0.62
SF3B3-202ENST00000562722 LRP11Q86VZ4 500 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 MEX3DQ86XN8 651 aaKnown RBP11.17□□□□□ -0.62
SF3B3-202ENST00000562722 SCAIQ8N9R8 606 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 CLDND2Q8NHS1 167 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 RDH5Q92781 318 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 LRR1Q96L50 414 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 MOGAT1Q96PD6 335 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 ZNF607Q96SK3 696 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 FOXB1Q99853 325 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 HIF1ANQ9NWT6 349 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 FBXL3Q9UKT7 428 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 GRIP1Q9Y3R0 1128 aa11.17□□□□□ -0.62
SF3B3-202ENST00000562722 A0A0B4J2E0 115 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 A0A1B0GX12 115 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 LRRN3E7EW58 273 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 C11orf98E9PRG8 122 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 POLR3GO15318 223 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-202ENST00000562722 TPST1O60507 370 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 SERPINB7O75635 380 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 RGS9O75916 674 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-202ENST00000562722 NAT2P11245 290 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 ACHEP22303 614 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 PPIBP23284 216 aaKnown RBP11.16□□□□□ -0.62
SF3B3-202ENST00000562722 SLC6A2P23975 617 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 COL8A2P25067 703 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 CDH12P55289 794 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 BIDP55957 195 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 ACTG1P63261 375 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 SCARB2Q14108 478 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 RAB39AQ14964 217 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 NKPD1Q17RQ9 610 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 ALKBH6Q3KRA9 238 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 THSD4Q6ZMP0 1018 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 CARM1Q86X55 608 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 ARMC8Q8IUR7 673 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 OR6S1Q8NH40 331 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 OR51F2Q8NH61 342 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 TMEM186Q96B77 213 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 SLC41A3Q96GZ6 507 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 DENND2DQ9H6A0 471 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-202ENST00000562722 ZNF275Q9NSD4 429 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-202ENST00000562722 MRPL39Q9NYK5 338 aaKnown RBP11.16□□□□□ -0.62
SF3B3-202ENST00000562722 SLC25A37Q9NYZ2 338 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 TREM2Q9NZC2 230 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 MYEF2Q9P2K5 600 aaKnown RBP11.16□□□□□ -0.62
SF3B3-202ENST00000562722 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-202ENST00000562722 ZNF346Q9UL40 294 aaKnown RBP11.16□□□□□ -0.62
SF3B3-202ENST00000562722 USH1CQ9Y6N9 552 aa11.16□□□□□ -0.62
SF3B3-202ENST00000562722 FAM157AC9JC47 383 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 PLPP3O14495 311 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 VENTXO95231 258 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 TFP02787 698 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 MSMBP08118 114 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 PATE4P0C8F1 98 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 ADORA3P0DMS8 318 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 SELENOVP59797 346 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 MAGOHP61326 146 aaKnown RBP11.15□□□□□ -0.62
SF3B3-202ENST00000562722 RUNX1T1Q06455 604 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 FAHD2BQ6P2I3 314 aaPredicted RBP11.15□□□□□ -0.62
SF3B3-202ENST00000562722 PXKQ7Z7A4 578 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 MSRB3Q8IXL7 192 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms