RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 OR52J3Q8NH60 311 aa17.45■□□□□ 0.38
TSPAN3-210ENST00000561277 LIPHQ8WWY8 451 aa17.45■□□□□ 0.38
TSPAN3-210ENST00000561277 CCDC124Q96CT7 223 aaKnown RBP17.45■□□□□ 0.38
TSPAN3-210ENST00000561277 CLPTM1LQ96KA5 538 aa17.45■□□□□ 0.38
TSPAN3-210ENST00000561277 ADAD1Q96M93 576 aaKnown RBP17.45■□□□□ 0.38
TSPAN3-210ENST00000561277 PIP5K1AQ99755 562 aa17.45■□□□□ 0.38
TSPAN3-210ENST00000561277 ULBP2Q9BZM5 246 aa17.45■□□□□ 0.38
TSPAN3-210ENST00000561277 ANKRD19PQ9H560 264 aa17.45■□□□□ 0.38
TSPAN3-210ENST00000561277 B3GAT2Q9NPZ5 323 aa17.45■□□□□ 0.38
TSPAN3-210ENST00000561277 PRPF19Q9UMS4 504 aaKnown RBP17.45■□□□□ 0.38
TSPAN3-210ENST00000561277 A0A1W2PRG6 482 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 A0A1W2PRQ8 180 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 EFCAB9A8MZ26 197 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 MCIDASD6RGH6 385 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 ABCD4O14678 606 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 BCL10O95999 233 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 ART1P52961 327 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 SH3BGRP55822 239 aaPredicted RBP17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 PRPS1P60891 318 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 UBE2NP61088 152 aaKnown RBP17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 TUBA1BP68363 451 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 TUBA4AP68366 448 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 PRKCDQ05655 676 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 DGCR6Q14129 220 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 ANKRD16Q6P6B7 361 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 PODNL1Q6PEZ8 512 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 TUBA1AQ71U36 451 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 RNF113BQ8IZP6 322 aaKnown RBP17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 KBTBD8Q8NFY9 601 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 OR13C2Q8NGS9 318 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 OR6X1Q8NH79 312 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 AKAP1Q92667 903 aaKnown RBP eCLIP17.44■□□□□ 0.382e-6■□□□□ 10
TSPAN3-210ENST00000561277 ZNF566Q969W8 418 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 LRR1Q96L50 414 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 THTPAQ9BU02 230 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 C1orf21Q9H246 121 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 INIPQ9NRY2 104 aa17.44■□□□□ 0.38
TSPAN3-210ENST00000561277 ALPK2Q86TB3 2170 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 TRAV27A0A087WT01 109 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 HTR3EA5X5Y0 456 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 FABP3P05413 133 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 SPIBQ01892 262 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 ALG10Q5BKT4 473 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 KLHL17Q6TDP4 642 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 TMEM108Q6UXF1 575 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 CDK20Q8IZL9 346 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 PIAS4Q8N2W9 510 aaPredicted RBP17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 OR51A7Q8NH64 312 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 BCL2L2Q92843 193 aaPredicted RBP17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 NEUROG1Q92886 237 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 SEPHS2Q99611 448 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 NELFAQ9H3P2 528 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 HIF3AQ9Y2N7 669 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 ROS1P08922 2347 aa17.43■□□□□ 0.38
TSPAN3-210ENST00000561277 TRBV4-1A0A0J9YWV2 114 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 WNT11O96014 354 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 TSPAN19P0C672 248 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 CD53P19397 219 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 SPOCK1Q08629 439 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 TOP3AQ13472 1001 aaPredicted RBP17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 TRIM25Q14258 630 aaKnown RBP17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 IQCCQ4KMZ1 466 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 OAFQ86UD1 273 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 IGFN1Q86VF2 1251 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 DHFR2Q86XF0 187 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 SLC25A44Q96H78 314 aaPredicted RBP17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 FAM46AQ96IP4 442 aaKnown RBP17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 CCL19Q99731 98 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 MUC13Q9H3R2 512 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 MAGED1Q9Y5V3 778 aaPredicted RBP17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 CELSR1Q9NYQ6 3014 aa17.42■□□□□ 0.38
TSPAN3-210ENST00000561277 ZNF99A8MXY4 864 aaPredicted RBP17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 CDC42EP2O14613 210 aa17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 HS3ST1O14792 307 aa17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 CD40P25942 277 aa17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 DAP3P51398 398 aaKnown RBP17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 MS4A2Q01362 244 aa17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 C20orf204Q6ZNR8 217 aa17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 ZDHHC21Q8IVQ6 265 aa17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 LILRB1Q8NHL6 650 aaPredicted RBP17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 ASB10Q8WXI3 467 aa17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 BOD1Q96IK1 185 aa17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 IL1RAPQ9NPH3 570 aa17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 OBP2BQ9NPH6 170 aa17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 GLTPQ9NZD2 209 aa17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 RAI1Q7Z5J4 1906 aaPredicted RBP17.41■□□□□ 0.38
TSPAN3-210ENST00000561277 GYG2O15488 501 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 GADD45GO95257 159 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 IGHG1P01857 330 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 PGA4P0DJD7 388 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 PGA3P0DJD8 388 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 PTAFRP25105 342 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 CAPZA2P47755 286 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 CLRN1P58418 232 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 RPS4XP62701 263 aaKnown RBP17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 RUNX1T1Q06455 604 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 SEC23BQ15437 767 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 LCN8Q6JVE9 175 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 SLC22A25Q6T423 547 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 OR4K5Q8NGD3 323 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms