RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 SUB1P53999 127 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMG20A-211ENST00000560867 CRISP3P54108 245 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 HMGCS1Q01581 520 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 TMEM183BQ1AE95 376 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 TRIM40Q6P9F5 258 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 LYPD2Q6UXB3 125 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 KDM7AQ6ZMT4 941 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 PCP2Q8IVA1 136 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 C12orf56Q8IXR9 622 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 TMEM183AQ8IXX5 376 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 TBC1D21Q8IYX1 336 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 TSNARE1Q96NA8 513 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 TAAR1Q96RJ0 339 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 TRIM62Q9BVG3 475 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 CLMPQ9H6B4 373 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 COX16Q9P0S2 106 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 ZNF639Q9UID6 485 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 ZNF223Q9UK11 482 aaPredicted RBP3.13□□□□□ -1.91
HMG20A-211ENST00000560867 CLEC4AQ9UMR7 237 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 PACSIN2Q9UNF0 486 aaPredicted RBP3.13□□□□□ -1.91
HMG20A-211ENST00000560867 PSG11Q9UQ72 335 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 MAP3K15Q6ZN16 1313 aa3.13□□□□□ -1.91
HMG20A-211ENST00000560867 IGLV4-60A0A075B6I1 120 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 IGKV2-28A0A075B6P5 120 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 DYNC1I1O14576 645 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 AIREO43918 545 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 MED6O75586 246 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 IGKV2D-28P01615 120 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 IGHV2-5P01817 119 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 CXCL5P42830 114 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 UBE2HP62256 183 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 CTSL3PQ5NE16 218 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 ZNF691Q5VV52 312 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 RGS9BPQ6ZS82 235 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 SLC25A48Q6ZT89 311 aaKnown RBP3.12□□□□□ -1.91
HMG20A-211ENST00000560867 EGFL6Q8IUX8 553 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 ZADH2Q8N4Q0 377 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 ZNF557Q8N988 423 aaPredicted RBP3.12□□□□□ -1.91
HMG20A-211ENST00000560867 EIF1ADQ8N9N8 165 aaKnown RBP3.12□□□□□ -1.91
HMG20A-211ENST00000560867 ZNF596Q8TC21 504 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMG20A-211ENST00000560867 OR8B4Q96RC9 309 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 HDHD3Q9BSH5 251 aaPredicted RBP3.12□□□□□ -1.91
HMG20A-211ENST00000560867 OSBPL10Q9BXB5 764 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 CDC42EP4Q9H3Q1 356 aaKnown RBP3.12□□□□□ -1.91
HMG20A-211ENST00000560867 NT5MQ9NPB1 228 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 ADAP2Q9NPF8 381 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 ETNK2Q9NVF9 386 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 DEC1Q9P2X7 70 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 HEBP2Q9Y5Z4 205 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 CDHR2Q9BYE9 1310 aa3.12□□□□□ -1.91
HMG20A-211ENST00000560867 TRAV39A0A0B4J263 110 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 HAS3O00219 553 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 SUPT3HO75486 399 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 SURF6O75683 361 aaKnown RBP3.11□□□□□ -1.91
HMG20A-211ENST00000560867 IL1BP01584 269 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 CRYBB2P43320 205 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 UBE2AP49459 152 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 CCR6P51684 374 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 FGF8P55075 233 aaPredicted RBP3.11□□□□□ -1.91
HMG20A-211ENST00000560867 FBXW4P57775 412 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 SEC61GP60059 68 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 PDIA2Q13087 525 aaKnown RBP3.11□□□□□ -1.91
HMG20A-211ENST00000560867 OR2A2Q6IF42 318 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 LRRC31Q6UY01 552 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 OR1L4Q8NGR5 311 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 ACTRT1Q8TDG2 376 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 TMEM158Q8WZ71 300 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 HSFY1Q96LI6 401 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 TSSK3Q96PN8 268 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 DNTTIP1Q9H147 329 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 PATZ1Q9HBE1 687 aaKnown RBP3.11□□□□□ -1.91
HMG20A-211ENST00000560867 CYTL1Q9NRR1 136 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 OR12D3Q9UGF7 316 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 TMCC3Q9ULS5 477 aa3.11□□□□□ -1.91
HMG20A-211ENST00000560867 ARID1AO14497 2285 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 PRSS37A4D1T9 235 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 SPAG7O75391 227 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 ZNF324O75467 553 aaPredicted RBP3.1□□□□□ -1.91
HMG20A-211ENST00000560867 IGLV2-23P01705 113 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 NCK1P16333 377 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 MX1P20591 662 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 RORAP35398 523 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 CCR8P51685 355 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 FZD2Q14332 565 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 STARD8Q92502 1023 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 PLEKHA8Q96JA3 519 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 ZFP14Q9HCL3 533 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 IKZF2Q9UKS7 526 aa3.1□□□□□ -1.91
HMG20A-211ENST00000560867 CCL21O00585 134 aa3.09□□□□□ -1.91
HMG20A-211ENST00000560867 ERLIN2O94905 339 aa3.09□□□□□ -1.91
HMG20A-211ENST00000560867 GAPDHP04406 335 aaKnown RBP3.09□□□□□ -1.91
HMG20A-211ENST00000560867 IGFBP3P17936 291 aaPredicted RBP3.09□□□□□ -1.91
HMG20A-211ENST00000560867 SLC2A5P22732 501 aa3.09□□□□□ -1.91
HMG20A-211ENST00000560867 BTCP35070 178 aa3.09□□□□□ -1.91
HMG20A-211ENST00000560867 RDXP35241 583 aaKnown RBP3.09□□□□□ -1.91
HMG20A-211ENST00000560867 ACTA1P68133 377 aa3.09□□□□□ -1.91
HMG20A-211ENST00000560867 GUCA2BQ16661 112 aa3.09□□□□□ -1.91
HMG20A-211ENST00000560867 TTLL9Q3SXZ7 439 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms