RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SETXQ7Z333 2677 aaKnown RBP12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 A0A087WUU8 490 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 J3KTA2 159 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 KPNA4O00629 521 aaPredicted RBP12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 GADD45GO95257 159 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 TNFAIP8O95379 198 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 TSPAN19P0C672 248 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 ADORA3P0DMS8 318 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 FUT1P19526 365 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 YAP1P46937 504 aaKnown RBP12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 PRPS1P60891 318 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 FAM27E3Q08E93 113 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 DAZAP2Q15038 168 aaPredicted RBP12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 EXOC3L2Q2M3D2 409 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 TMPRSS11FQ6ZWK6 438 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 SLC46A3Q7Z3Q1 461 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 P3H2Q8IVL5 708 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 C17orf78Q8N4C9 275 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 ZIC4Q8N9L1 334 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 OR4C15Q8NGM1 316 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 SLC7A13Q8TCU3 470 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 CYGBQ8WWM9 190 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 KISS1RQ969F8 398 aaPredicted RBP12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 BOD1Q96IK1 185 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 LRR1Q96L50 414 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 TOR3AQ9H497 397 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 REEP1Q9H902 201 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 UPB1Q9UBR1 384 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 HIF3AQ9Y2N7 669 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 SAMHD1Q9Y3Z3 626 aaKnown RBP12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 ADGRG4Q8IZF6 3080 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 SH3D21A4FU49 640 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 TRIM64A6NGJ6 449 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 CENPBD1B2RD01 187 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 MS4A18H0YCH9 400 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 CASKO14936 926 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 TRAF3IP2O43734 574 aaPredicted RBP12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 SLC43A1O75387 559 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 NR2C1P13056 603 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 IFI30P13284 250 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 AHCYP23526 432 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 IL32P24001 234 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 DAPP51397 102 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 HMGA2P52926 109 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 SH3BGRP55822 239 aaPredicted RBP12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 IL1RL1Q01638 556 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 APOFQ13790 326 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 STK11Q15831 433 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 RFX4Q33E94 735 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 MS4A18Q3C1V0 323 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 ZIK1Q3SY52 487 aaPredicted RBP12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 KDM4DQ6B0I6 523 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 NRMQ8IXM6 262 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 UBE2J2Q8N2K1 259 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 PFN4Q8NHR9 129 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 ZNF385AQ96PM9 386 aaKnown RBP12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 MOV10Q9HCE1 1003 aaKnown RBP12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 C20orf141Q9NUB4 165 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 FAM118AQ9NWS6 357 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 TAS2R5Q9NYW4 299 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 RHCGQ9UBD6 479 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 TESMINQ9Y4I5 508 aa12.36□□□□□ -0.43
PKNOX1-209ENST00000560448 E9PQ18 207 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 RPL36A-HNRNPH2H7BZ11 118 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 KRT33AO76009 404 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 ZNF432O94892 652 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 CLIC3O95833 236 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 ADAP00813 363 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 SAGP10523 405 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 COL8A1P27658 744 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 MPGP29372 298 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 RRM2P31350 389 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 CCKARP32238 428 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 LIMS1P48059 325 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 DAP3P51398 398 aaKnown RBP12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 CLDN17P56750 224 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 RPS4XP62701 263 aaKnown RBP12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 SPIBQ01892 262 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 POU3F1Q03052 451 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 FGD3Q5JSP0 725 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 KRT80Q6KB66 452 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 NIPAL3Q6P499 406 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 FAHD1Q6P587 224 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 OR6X1Q8NH79 312 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 HSD17B8Q92506 261 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 MED18Q9BUE0 208 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 NGBQ9NPG2 151 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 B3GAT2Q9NPZ5 323 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 CRIM1Q9NZV1 1036 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 PDP1Q9P0J1 537 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 SEC14L4Q9UDX3 406 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 PRSS50Q9UI38 385 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 TMCC3Q9ULS5 477 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 LYVE1Q9Y5Y7 322 aa12.35□□□□□ -0.43
PKNOX1-209ENST00000560448 A0A1W2PRG6 482 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 ZNF726A6NNF4 738 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 EFCAB9A8MZ26 197 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 ZNF587BE7ETH6 402 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 LRRN3E7EW58 273 aa12.34□□□□□ -0.43
PKNOX1-209ENST00000560448 SLC16A6O15403 523 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms