RNA–Protein interactions for RNA: ENST00000560179.1

ETFA-212, Transcript of electron transfer flavoprotein subunit alpha, human

TSL 2

Gene ETFA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ETFA-212	ENST00000560179	TSPAN12	O95859	305 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	IL1B	P01584	269 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	FGF1	P05230	155 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	TCN1	P20061	433 aa	Predicted RBP	4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	SLC2A5	P22732	501 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	CEBPD	P49716	269 aa	Predicted RBP	4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	CHIT1	Q13231	466 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	AQP6	Q13520	282 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	COA6	Q5JTJ3	125 aa	Known RBP	4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	TRIM40	Q6P9F5	258 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	LYPD2	Q6UXB3	125 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	OR1L4	Q8NGR5	311 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	ACTRT1	Q8TDG2	376 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	CNN2	Q99439	309 aa	Known RBP	4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	CRACR2A	Q9BSW2	395 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	PIGL	Q9Y2B2	252 aa		4.23	□□□□□ -1.73
ETFA-212	ENST00000560179	AIRE	O43918	545 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	MGRN1	O60291	552 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	ZNF30	P17039	623 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	GPR6	P46095	362 aa	Predicted RBP	4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	MNAT1	P51948	309 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	HMGCS1	Q01581	520 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	OR2A2	Q6IF42	318 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	PANX2	Q96RD6	677 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	FMO2	Q99518	471 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	SORT1	Q99523	831 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	LCE3D	Q9BYE3	92 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	ANKRD19P	Q9H560	264 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	TM9SF3	Q9HD45	589 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	MSH6	P52701	1360 aa		4.22	□□□□□ -1.73
ETFA-212	ENST00000560179	IGKV1D-13	A0A0B4J2D9	117 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	CLRN2	A0PK11	232 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	XKRY	O14609	159 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	ANGPTL7	O43827	346 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	IGHV2-5	P01817	119 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	IGKV1-13	P0DP09	117 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	HSD17B2	P37059	387 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	SSR1	P43307	286 aa	Known RBP	4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	ENPEP	Q07075	957 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	MRPL28	Q13084	256 aa	Known RBP	4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	ZBED5	Q49AG3	693 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	LRRC31	Q6UY01	552 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	BHLHE23	Q8NDY6	225 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	CD300LF	Q8TDQ1	290 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	ZFP90	Q8TF47	636 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	OR8B4	Q96RC9	309 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	SLC39A3	Q9BRY0	314 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	MFF	Q9GZY8	342 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	NECAP2	Q9NVZ3	263 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	NFASC	O94856	1347 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	CDHR2	Q9BYE9	1310 aa		4.21	□□□□□ -1.74
ETFA-212	ENST00000560179	CARMIL3	Q8ND23	1372 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	ERVV-1	B6SEH8	477 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	CPLX1	O14810	134 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	BGLAP	P02818	100 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	ZDHHC11B	P0C7U3	371 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	UBTFL1	P0CB47	393 aa	Predicted RBP	4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	YAP1	P46937	504 aa	Known RBP	4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	SUB1	P53999	127 aa	Known RBP eCLIP	4.2	□□□□□ -1.74	4e-37	■■■■■ 47.2
ETFA-212	ENST00000560179	SLA	Q13239	276 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	ZNF77	Q15935	545 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	H2AFV	Q71UI9	128 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	ZNF679	Q8IYX0	411 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	ZNF557	Q8N988	423 aa	Predicted RBP	4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	EXOSC8	Q96B26	276 aa	Known RBP	4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	SGK3	Q96BR1	496 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	UGT1A7	Q9HAW7	530 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	UGT1A10	Q9HAW8	530 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179	UGT1A8	Q9HAW9	530 aa		4.2	□□□□□ -1.74
ETFA-212	ENST00000560179		A0A1B0GVI7	797 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	SURF6	O75683	361 aa	Known RBP	4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	SMIM10L1	P0DMW3	83 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	IGFBP3	P17936	291 aa	Predicted RBP	4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	RORA	P35398	523 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	VHL	P40337	213 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	GYG1	P46976	350 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	SEC61G	P60059	68 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	ACTR1A	P61163	376 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	RPS21	P63220	83 aa	Known RBP	4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	IRX3	P78415	501 aa	Predicted RBP	4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	LINC00173	Q6ZV60	143 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	SDR42E1	Q8WUS8	393 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	MED8	Q96G25	268 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	SMIM10	Q96HG1	83 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	TSNARE1	Q96NA8	513 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	NPY6R	Q99463	290 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	GON7	Q9BXV9	100 aa		4.19	□□□□□ -1.74
ETFA-212	ENST00000560179	CEMIP	Q8WUJ3	1361 aa		4.18	□□□□□ -1.74
ETFA-212	ENST00000560179	LRCOL1	A6NCL2	159 aa		4.18	□□□□□ -1.74
ETFA-212	ENST00000560179	HAS3	O00219	553 aa		4.18	□□□□□ -1.74
ETFA-212	ENST00000560179	GAPDH	P04406	335 aa	Known RBP	4.18	□□□□□ -1.74
ETFA-212	ENST00000560179	OMG	P23515	440 aa		4.18	□□□□□ -1.74
ETFA-212	ENST00000560179	EPS15	P42566	896 aa		4.18	□□□□□ -1.74
ETFA-212	ENST00000560179	UBE2A	P49459	152 aa		4.18	□□□□□ -1.74
ETFA-212	ENST00000560179	TTLL9	Q3SXZ7	439 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms