RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SVILO95425 2214 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 FAM183AA6NL82 134 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 ZAR1LA6NP61 321 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 CLCA1A8K7I4 914 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 FAM171A2A8MVW0 826 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 E9PQ18 207 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 MS4A18H0YCH9 400 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 PYCARD-AS1I3L0S3 204 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 PLPP3O14495 311 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 BHLHE40O14503 412 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 BCKDKO14874 412 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 RNF13O43567 381 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 PRKYO43930 277 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 HCN1O60741 890 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 PTP4A3O75365 173 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 GPANK1O95872 356 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 TGM6O95932 706 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 IGHG3P01860 377 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 TPOP07202 933 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 ADORA3P0DMS8 318 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 CLUP10909 449 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 OSMP13725 252 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 HOXB6P17509 224 aaKnown RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 HOXA5P20719 270 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 GTF2E2P29084 291 aaKnown RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 UQCRC1P31930 480 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 GCKP35557 465 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 CAPGP40121 348 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 AGFG1P52594 562 aaKnown RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 NUDT6P53370 316 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 CRISP1P54107 249 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 CTXN1P60606 82 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 RPS4XP62701 263 aaKnown RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 ADARB1P78563 741 aaKnown RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 POU3F1Q03052 451 aaPredicted RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 MVKQ03426 396 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 FMODQ06828 376 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 KLRB1Q12918 225 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 NPRL3Q12980 569 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 PMS2P3Q13401 168 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 GINS1Q14691 196 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 PON3Q15166 354 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 PTGES3Q15185 160 aaKnown RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 SMN1Q16637 294 aaKnown RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 PGGHGQ32M88 737 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 MS4A18Q3C1V0 323 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 ZBED5Q49AG3 693 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 MESTQ5EB52 335 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 EMC4Q5J8M3 183 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 EEF1A1P5Q5VTE0 462 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 VASNQ6EMK4 673 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 ABLIM2Q6H8Q1 611 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 LAIR2Q6ISS4 152 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 ZNF585AQ6P3V2 769 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 B3GLCTQ6Y288 498 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 TMPPEQ6ZT21 453 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 PTCHD4Q6ZW05 846 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 TMPRSS11FQ6ZWK6 438 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 MAMDC2Q7Z304 686 aaPredicted RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 GPAT4Q86UL3 456 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 RNF113BQ8IZP6 322 aaKnown RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 GCNT2Q8N0V5 402 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 PACRGLQ8N7B6 248 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 CYB561A3Q8NBI2 242 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 SDR9C7Q8NEX9 313 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 OR5J2Q8NH18 312 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 MFSD8Q8NHS3 518 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 CNIH3Q8TBE1 160 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 FAM81AQ8TBF8 368 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 TEX47Q8TBZ9 253 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 DNAJC9Q8WXX5 260 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 HTRA1Q92743 480 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 MIB2Q96AX9 1013 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 CNBD2Q96M20 576 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 Q96M85 177 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 ZNF385AQ96PM9 386 aaKnown RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 TRIB1Q96RU8 372 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 EMC6Q9BV81 110 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 KATNB1Q9BVA0 655 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 IFT27Q9BW83 186 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 TAPBPLQ9BX59 468 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 TSSK6Q9BXA6 273 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 HCAR1Q9BXC0 346 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 POLDIP3Q9BY77 421 aaKnown RBP4.64□□□□□ -1.67
SPG11-220ENST00000559933 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 POTEKPQ9BYX7 375 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 SLC19A3Q9BZV2 496 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 FKRPQ9H9S5 495 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 ZNF556Q9HAH1 456 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 ACKR4Q9NPB9 350 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 CHST11Q9NPF2 352 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 NANSQ9NR45 359 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 RASSF1Q9NS23 344 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 FAM118AQ9NWS6 357 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 QPCTLQ9NXS2 382 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 TVP23BQ9NYZ1 205 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 DNAJC27Q9NZQ0 273 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 TUBD1Q9UJT1 453 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 TINAGQ9UJW2 476 aa4.64□□□□□ -1.67
SPG11-220ENST00000559933 ZNF229Q9UJW7 825 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms