RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 AGR2O95994 175 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 NPPAP01160 153 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 GSNP06396 782 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 RPSAP08865 295 aaKnown RBP5.02□□□□□ -1.61
USP3-215ENST00000559771 CSF3P09919 207 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 CECR9P0C854 216 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 GKN3PP0CG01 181 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 CDH2P19022 906 aaPredicted RBP5.02□□□□□ -1.61
USP3-215ENST00000559771 TNFRSF1AP19438 455 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 HTR3AP46098 478 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 HSPA13P48723 471 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 SELENOPP49908 381 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 KHKP50053 298 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 MAP2K6P52564 334 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 SH3BGRP55822 239 aaPredicted RBP5.02□□□□□ -1.61
USP3-215ENST00000559771 NME5P56597 212 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 PRPS1P60891 318 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 TUBA1BP68363 451 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 TUBA4AP68366 448 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 EGR4Q05215 589 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 TRAP1Q12931 704 aaKnown RBP5.02□□□□□ -1.61
USP3-215ENST00000559771 GGTLC2Q14390 218 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 OR7A5Q15622 319 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 EFNB3Q15768 340 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 TBRG1Q3YBR2 411 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 SLC9B1Q4ZJI4 515 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 OTUD3Q5T2D3 398 aaPredicted RBP5.02□□□□□ -1.61
USP3-215ENST00000559771 C1QTNF12Q5T7M4 302 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 ATAD3BQ5T9A4 648 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 ANXA8L1Q5VT79 327 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 ANKRD16Q6P6B7 361 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 NHLRC1Q6VVB1 395 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 ZNF836Q6ZNA1 936 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 CREB3L2Q70SY1 520 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 TUBA1AQ71U36 451 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 AAED1Q7RTV5 226 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 DHDDSQ86SQ9 333 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 COMTD1Q86VU5 262 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 VRK2Q86Y07 508 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 WDFY1Q8IWB7 410 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 CMIPQ8IY22 773 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 DEFB107AQ8IZN7 70 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 ZCCHC24Q8N2G6 241 aaKnown RBP5.02□□□□□ -1.61
USP3-215ENST00000559771 CLIP4Q8N3C7 705 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 PCYOX1LQ8NBM8 494 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 PNPT1Q8TCS8 783 aaKnown RBP5.02□□□□□ -1.61
USP3-215ENST00000559771 PMM1Q92871 262 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 C1orf159Q96HA4 380 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 SLC38A2Q96QD8 506 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 PTDSS2Q9BVG9 487 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 SF3B5Q9BWJ5 86 aaKnown RBP5.02□□□□□ -1.61
USP3-215ENST00000559771 NUF2Q9BZD4 464 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 BPESC1Q9GZL8 116 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 SHARPINQ9H0F6 387 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 PLK3Q9H4B4 646 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 Q9H521 79 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 MTHFD2LQ9H903 347 aaPredicted RBP5.02□□□□□ -1.61
USP3-215ENST00000559771 CHODLQ9H9P2 273 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 FKRPQ9H9S5 495 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 LIN7BQ9HAP6 207 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 C8orf4Q9NR00 106 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 CA10Q9NS85 328 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 AIG1Q9NVV5 245 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 PARPBPQ9NWS1 579 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 B3GAT1Q9P2W7 334 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 UPB1Q9UBR1 384 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 LPAR3Q9UBY5 353 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 SEC14L4Q9UDX3 406 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 SCOCQ9UIL1 159 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 POMPQ9Y244 141 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 GPR45Q9Y5Y3 372 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.02□□□□□ -1.616e-6■■■■□ 22.5
USP3-215ENST00000559771 A0A096LPE4 126 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 ARPC4-TTLL3A0A0A6YYG9 625 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 LOC100653049A0A140TA62 436 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 TMEM238LA0A1B0GVL6 79 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 A0A1W2PPZ6 126 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 LOC390937A0A1W2PQ73 354 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 NDUFS8O00217 210 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 UBDO15205 165 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 FRS3O43559 492 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 KRT34O76011 436 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 STAMBPO95630 424 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 IGKV3-15P01624 115 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 PGRP06401 933 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 GPIP06744 558 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 DBIP07108 87 aaKnown RBP5.01□□□□□ -1.61
USP3-215ENST00000559771 TACSTD2P09758 323 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 TFPTP0C1Z6 253 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 OR4A8P0C604 315 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 ETFAP13804 333 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 ZNF23P17027 643 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 HOXB9P17482 250 aaPredicted RBP5.01□□□□□ -1.61
USP3-215ENST00000559771 HOXB6P17509 224 aaKnown RBP5.01□□□□□ -1.61
USP3-215ENST00000559771 SRD5A1P18405 259 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 LBPP18428 481 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 GIFP27352 417 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 EPHA3P29320 983 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 GSTT1P30711 240 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 S100A3P33764 101 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms