RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ST3GAL3Q11203 375 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 PGGHGQ32M88 737 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 IFI44LQ53G44 452 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 PHYHD1Q5SRE7 291 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 C1QTNF12Q5T7M4 302 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 PRSS57Q6UWY2 283 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 HACD2Q6Y1H2 254 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 Q71RC1 249 aaPredicted RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 C20orf196Q8IYI0 205 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 MUC15Q8N387 334 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 RNF148Q8N7C7 305 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 IGFBPL1Q8WX77 278 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 GEMIN6Q8WXD5 167 aaKnown RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 NANOS1Q8WY41 292 aaKnown RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 ZNF566Q969W8 418 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 ZNF837Q96EG3 531 aaPredicted RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 HSH2DQ96JZ2 352 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 PRRC1Q96M27 445 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 ADAD1Q96M93 576 aaKnown RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 SMR3AQ99954 134 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 DHRS9Q9BPW9 319 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 ZNF426Q9BUY5 554 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 FNDC11Q9BVV2 318 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 CACNG6Q9BXT2 260 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 MYLK2Q9H1R3 596 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 NELFAQ9H3P2 528 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 GSX1Q9H4S2 264 aaPredicted RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 MOV10Q9HCE1 1003 aaKnown RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 MEPEQ9NQ76 525 aaPredicted RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 ZNF701Q9NV72 531 aaPredicted RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 EGFL7Q9UHF1 273 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 USF3Q68DE3 2245 aa7.15□□□□□ -1.27
SNX1-207ENST00000559401 MAP1AP78559 2803 aaPredicted RBP7.14□□□□□ -1.27
SNX1-207ENST00000559401 J3KTA2 159 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 SSX4O60224 188 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 NDUFS7O75251 213 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 DCTN3O75935 186 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 OR7A10O76100 309 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 BCL10O95999 233 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 HLA-HP01893 362 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 CELA3BP08861 270 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 ASAH2BP0C7U1 165 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 CECR9P0C854 216 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 SAGP10523 405 aaPredicted RBP7.14□□□□□ -1.27
SNX1-207ENST00000559401 THRBP10828 461 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 HOXB1P14653 301 aaPredicted RBP7.14□□□□□ -1.27
SNX1-207ENST00000559401 TCN1P20061 433 aaPredicted RBP7.14□□□□□ -1.27
SNX1-207ENST00000559401 PAX7P23759 505 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 PRDX6P30041 224 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 AQP2P41181 271 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 NUDT6P53370 316 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 CLRN1P58418 232 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 CHRNB3Q05901 458 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 RPL18Q07020 188 aaKnown RBP7.14□□□□□ -1.27
SNX1-207ENST00000559401 PIGFQ07326 219 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 ZP4Q12836 540 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 TOP3AQ13472 1001 aaPredicted RBP7.14□□□□□ -1.27
SNX1-207ENST00000559401 TRAM2Q15035 370 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 CLEC12BQ2HXU8 276 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 ZNF544Q6NX49 715 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 VHLLQ6RSH7 139 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 CLEC9AQ6UXN8 241 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 SLC46A3Q7Z3Q1 461 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 BIVMQ86UB2 503 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 DTX2Q86UW9 622 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 MDP1Q86V88 176 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 CYP4Z1Q86W10 505 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 CIARTQ8N365 385 aaPredicted RBP7.14□□□□□ -1.27
SNX1-207ENST00000559401 MAGEE2Q8TD90 523 aaPredicted RBP7.14□□□□□ -1.27
SNX1-207ENST00000559401 FBXO17Q96EF6 278 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 LRR1Q96L50 414 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 FOXB1Q99853 325 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 KATNB1Q9BVA0 655 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 SEC61A2Q9H9S3 476 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 BARX1Q9HBU1 254 aaPredicted RBP7.14□□□□□ -1.27
SNX1-207ENST00000559401 SPAG4Q9NPE6 437 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 DLL4Q9NR61 685 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 INIPQ9NRY2 104 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 CBLN4Q9NTU7 201 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 C20orf141Q9NUB4 165 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 TAS2R5Q9NYW4 299 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 GDF2Q9UK05 429 aaPredicted RBP7.14□□□□□ -1.27
SNX1-207ENST00000559401 RPS6KA6Q9UK32 745 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 A4GNTQ9UNA3 340 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 ARL2BPQ9Y2Y0 163 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 SNX13Q9Y5W8 968 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 V9GYQ6 96 aa7.14□□□□□ -1.27
SNX1-207ENST00000559401 ACANP16112 2415 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 OVOL3O00110 214 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 FARS2O95363 451 aaKnown RBP7.13□□□□□ -1.27
SNX1-207ENST00000559401 RAB36O95755 333 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 CD8AP01732 235 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 IGHV4-39P01824 125 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 IGHG1P01857 330 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 BMP4P12644 408 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 PAX1P15863 534 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 CBR1P16152 277 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 APOBEC3AP31941 199 aaPredicted RBP7.13□□□□□ -1.27
SNX1-207ENST00000559401 ARR3P36575 388 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 ACVR1BP36896 505 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms