RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ALKBH3Q96Q83 286 aaPredicted RBP22.51■■□□□ 1.19
SMAD6-202ENST00000557916 ACTR6Q9GZN1 396 aa22.51■■□□□ 1.19
SMAD6-202ENST00000557916 ARMC1Q9NVT9 282 aa22.51■■□□□ 1.19
SMAD6-202ENST00000557916 TAS2R16Q9NYV7 291 aa22.51■■□□□ 1.19
SMAD6-202ENST00000557916 ANKHD1Q8IWZ3 2542 aaKnown RBP22.5■■□□□ 1.19
SMAD6-202ENST00000557916 SH3D21A4FU49 640 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 ZNF587BE7ETH6 402 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 HNRNPRO43390 633 aaKnown RBP22.5■■□□□ 1.19
SMAD6-202ENST00000557916 ITGA5P08648 1049 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 RPL4P36578 427 aaKnown RBP22.5■■□□□ 1.19
SMAD6-202ENST00000557916 GSSP48637 474 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 CTXN1P60606 82 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 C9orf135Q5VTT2 229 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 ZNF770Q6IQ21 691 aaPredicted RBP22.5■■□□□ 1.19
SMAD6-202ENST00000557916 S100PBPQ96BU1 408 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 SLC25A44Q96H78 314 aaPredicted RBP22.5■■□□□ 1.19
SMAD6-202ENST00000557916 LRR1Q96L50 414 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 MED18Q9BUE0 208 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 NDEL1Q9GZM8 345 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 OR10A4Q9H209 315 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 TXNIPQ9H3M7 391 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 KCNN3Q9UGI6 736 aa22.5■■□□□ 1.19
SMAD6-202ENST00000557916 CIB4A0PJX0 185 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 NPIPB13A6NJU9 1138 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 NPIPB4C9JG80 1138 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 NDUFB2O95178 105 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 GASTP01350 101 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 PPP3CBP16298 524 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 ZNF26P17031 533 aaPredicted RBP22.49■■□□□ 1.19
SMAD6-202ENST00000557916 MPGP29372 298 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 TSPAN31Q12999 210 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 LINGO2Q7L985 606 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 OR6N1Q8NGY5 312 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 FAM222BQ8WU58 562 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 ASB10Q8WXI3 467 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 ZNF566Q969W8 418 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 DACH2Q96NX9 599 aa22.49■■□□□ 1.19
SMAD6-202ENST00000557916 PKDREJQ9NTG1 2253 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 M0R3G1 203 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 DEAF1O75398 565 aaPredicted RBP22.48■■□□□ 1.19
SMAD6-202ENST00000557916 E2F6O75461 281 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 EPXP11678 715 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 CSNK1A1P48729 337 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 ROR2Q01974 943 aaKnown RBP22.48■■□□□ 1.19
SMAD6-202ENST00000557916 TOP3AQ13472 1001 aaPredicted RBP22.48■■□□□ 1.19
SMAD6-202ENST00000557916 PHYHD1Q5SRE7 291 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 HMBOX1Q6NT76 420 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 C22orf34Q6ZV56 151 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 HDDC2Q7Z4H3 204 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 TMEM179BQ7Z7N9 219 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 AQP11Q8NBQ7 271 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 OR10G2Q8NGC3 310 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 GIPC3Q8TF64 312 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 MARVELD3Q96A59 401 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 ZNF346Q9UL40 294 aaKnown RBP22.48■■□□□ 1.19
SMAD6-202ENST00000557916 ALPK2Q86TB3 2170 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 RAD51DO75771 328 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 IGHMP01871 453 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 RPL27P61353 136 aaKnown RBP22.48■■□□□ 1.19
SMAD6-202ENST00000557916 TGFBR3Q03167 851 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 ARMC4Q5T2S8 1044 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 SMARCD3Q6STE5 483 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 USB1Q9BQ65 265 aaKnown RBP22.48■■□□□ 1.19
SMAD6-202ENST00000557916 KATNB1Q9BVA0 655 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 POLDIP3Q9BY77 421 aaKnown RBP22.48■■□□□ 1.19
SMAD6-202ENST00000557916 DENND2DQ9H6A0 471 aaPredicted RBP22.48■■□□□ 1.19
SMAD6-202ENST00000557916 CRLF2Q9HC73 371 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 GPR35Q9HC97 309 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 B3GAT2Q9NPZ5 323 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 STX18Q9P2W9 335 aaKnown RBP22.48■■□□□ 1.19
SMAD6-202ENST00000557916 IL20RAQ9UHF4 553 aa22.48■■□□□ 1.19
SMAD6-202ENST00000557916 CENPEQ02224 2701 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 RPL36A-HNRNPH2H7BZ11 118 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 IGHG1P01857 330 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 CD14P08571 375 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 CDH2P19022 906 aaPredicted RBP22.47■■□□□ 1.19
SMAD6-202ENST00000557916 FXYD6P3P58550 94 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 ERVK-25P63136 954 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 RUNX1T1Q06455 604 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 GABRA6Q16445 453 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 CRYBG3Q68DQ2 2970 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 THSD4Q6ZMP0 1018 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 FANK1Q8TC84 345 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 TMEM54Q969K7 222 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 ZC3HAV1LQ96H79 300 aaKnown RBP22.47■■□□□ 1.19
SMAD6-202ENST00000557916 TSPAN32Q96QS1 320 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 NTN4Q9HB63 628 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 PDP1Q9P0J1 537 aaPredicted RBP22.47■■□□□ 1.19
SMAD6-202ENST00000557916 MGAT4BQ9UQ53 548 aa22.47■■□□□ 1.19
SMAD6-202ENST00000557916 CASKO14936 926 aa22.46■■□□□ 1.19
SMAD6-202ENST00000557916 PGA4P0DJD7 388 aa22.46■■□□□ 1.19
SMAD6-202ENST00000557916 PGA3P0DJD8 388 aa22.46■■□□□ 1.19
SMAD6-202ENST00000557916 ACADSP16219 412 aa22.46■■□□□ 1.19
SMAD6-202ENST00000557916 FASP25445 335 aa22.46■■□□□ 1.19
SMAD6-202ENST00000557916 CLRN1P58418 232 aa22.46■■□□□ 1.19
SMAD6-202ENST00000557916 STK11Q15831 433 aa22.46■■□□□ 1.19
SMAD6-202ENST00000557916 ATP6AP1Q15904 470 aa22.46■■□□□ 1.19
SMAD6-202ENST00000557916 OR7E24Q6IFN5 339 aa22.46■■□□□ 1.19
SMAD6-202ENST00000557916 PYDC1Q8WXC3 89 aa22.46■■□□□ 1.19
SMAD6-202ENST00000557916 GTPBP3Q969Y2 492 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms