RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 SEC24CP53992 1094 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 RAB1AP62820 205 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 CDK6Q00534 326 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 CAMK2DQ13557 499 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 CCNIQ14094 377 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 OR1Q1Q15612 314 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 FXNQ16595 210 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 TRMT5Q32P41 509 aaKnown RBP13.71□□□□□ -0.21
SCFD1-224ENST00000557713 GCNT6Q5T4J0 391 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 PXKQ7Z7A4 578 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 LRP11Q86VZ4 500 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 CARM1Q86X55 608 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 KRT73Q86Y46 540 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 MOGAT1Q96PD6 335 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 EPYCQ99645 322 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 SPATA5L1Q9BVQ7 753 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 ASPNQ9BXN1 380 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 RACGAP1Q9H0H5 632 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 TMEM27Q9HBJ8 222 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 SLC52A3Q9NQ40 469 aa13.71□□□□□ -0.21
SCFD1-224ENST00000557713 MRPL39Q9NYK5 338 aaKnown RBP13.71□□□□□ -0.21
SCFD1-224ENST00000557713 TESQ9UGI8 421 aaKnown RBP13.71□□□□□ -0.21
SCFD1-224ENST00000557713 ZNF726A6NNF4 738 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 LRRN3E7EW58 273 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 M0R233 179 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 PLPP3O14495 311 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 B4GALT1P15291 398 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 TCN1P20061 433 aaPredicted RBP13.7□□□□□ -0.22
SCFD1-224ENST00000557713 PCMT1P22061 227 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 GIPRP48546 466 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 PTDSS1P48651 473 aaKnown RBP13.7□□□□□ -0.22
SCFD1-224ENST00000557713 PUDPQ08623 228 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 PMS2P3Q13401 168 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 PAGE3Q5JUK9 113 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 BLOC1S3Q6QNY0 202 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 DEF8Q6ZN54 512 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 MEX3DQ86XN8 651 aaKnown RBP13.7□□□□□ -0.22
SCFD1-224ENST00000557713 OR6N1Q8NGY5 312 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 CLDND2Q8NHS1 167 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 RDH5Q92781 318 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 FOXB1Q99853 325 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 SYT3Q9BQG1 590 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 SELENONQ9NZV5 590 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 MYEF2Q9P2K5 600 aaKnown RBP13.7□□□□□ -0.22
SCFD1-224ENST00000557713 METRNQ9UJH8 293 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 USH1CQ9Y6N9 552 aa13.7□□□□□ -0.22
SCFD1-224ENST00000557713 TRBV5-3A0A0A0MS03 114 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 PRORSD1PA6NEY8 169 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 GPX2P18283 190 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 ACHEP22303 614 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 PPIBP23284 216 aaKnown RBP13.69□□□□□ -0.22
SCFD1-224ENST00000557713 ALDH3B1P43353 468 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 GPR6P46095 362 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-224ENST00000557713 CDH12P55289 794 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 RGS8P57771 180 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-224ENST00000557713 LINC00114Q6XXX2 140 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 RINLQ6ZS11 566 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 GLCCI1Q86VQ1 547 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 SNX32Q86XE0 403 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 ZNF584Q8IVC4 421 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 BHLHE22Q8NFJ8 381 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-224ENST00000557713 FGFBP3Q8TAT2 258 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 RNF217Q8TC41 542 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 TMEM43Q9BTV4 400 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 ULBP2Q9BZM5 246 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 IKZF5Q9H5V7 419 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 TMEM38AQ9H6F2 299 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 NKIRAS1Q9NYS0 192 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 VAPAQ9P0L0 249 aa13.69□□□□□ -0.22
SCFD1-224ENST00000557713 FAM157AC9JC47 383 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 WNT9BO14905 357 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 UBL3O95164 117 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 VENTXO95231 258 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 RAB36O95755 333 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 TMEM33P57088 247 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 STX1BP61266 288 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 MAGOHP61326 146 aaKnown RBP13.68□□□□□ -0.22
SCFD1-224ENST00000557713 NCALDP61601 193 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 RPS23P62266 143 aaKnown RBP13.68□□□□□ -0.22
SCFD1-224ENST00000557713 SCARB2Q14108 478 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 RAB39AQ14964 217 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 MAD2L1BPQ15013 274 aaPredicted RBP13.68□□□□□ -0.22
SCFD1-224ENST00000557713 SWT1Q5T5J6 900 aaKnown RBP13.68□□□□□ -0.22
SCFD1-224ENST00000557713 GKAP1Q5VSY0 366 aaPredicted RBP13.68□□□□□ -0.22
SCFD1-224ENST00000557713 REP15Q6BDI9 236 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 WDR88Q6ZMY6 472 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 PIWIL3Q7Z3Z3 882 aaKnown RBP13.68□□□□□ -0.22
SCFD1-224ENST00000557713 SKA3Q8IX90 412 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.68□□□□□ -0.22
SCFD1-224ENST00000557713 OR5J2Q8NH18 312 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 TMEM54Q969K7 222 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 YIPF5Q969M3 257 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 TLCD1Q96CP7 247 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 SPDL1Q96EA4 605 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 ZNF607Q96SK3 696 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 EVA1AQ9H8M9 152 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 FBXL3Q9UKT7 428 aa13.68□□□□□ -0.22
SCFD1-224ENST00000557713 A0A0A6YYJ9 748 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 SERPINB7O75635 380 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 MFN2O95140 757 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms