RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 ZNF85Q03923 595 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 CAMK2BQ13554 666 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 GPR50Q13585 617 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 TOMM20Q15388 145 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 DGUOKQ16854 277 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 CRTC2Q53ET0 693 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-233ENST00000557529 SPINK14Q6IE38 97 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 DNM1P34Q6PK57 102 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 LINC00696Q6ZRV3 163 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 SLC35D2Q76EJ3 337 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 SLC16A9Q7RTY1 509 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 VASH2Q86V25 355 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 UEVLDQ8IX04 471 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 PM20D2Q8IYS1 436 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 SYS1Q8N2H4 156 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 OR14L1PQ8NHC6 308 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 NDNFQ8TB73 568 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 ASB10Q8WXI3 467 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 TM9SF4Q92544 642 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 RELTQ969Z4 430 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 UBL7Q96S82 380 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-233ENST00000557529 MNTQ99583 582 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 CHCHD6Q9BRQ6 235 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 OR2B2Q9GZK3 357 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 RNF32Q9H0A6 362 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 SYT4Q9H2B2 425 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 SRA1Q9HD15 236 aaKnown RBP11.2□□□□□ -0.62
SHMT2-233ENST00000557529 TRIM36Q9NQ86 728 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 DEPPQ9NTK1 212 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 SSR3Q9UNL2 185 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 MYO15AQ9UKN7 3530 aa11.2□□□□□ -0.62
SHMT2-233ENST00000557529 PTPRBP23467 1997 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 LOC102725191A0A1B0GVB3 256 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 A0A1W2PQL4 384 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-233ENST00000557529 SLC22A23A1A5C7 686 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 OR5H15A6NDH6 313 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 AQP7P3A6NL99 342 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 ZNF670-ZNF695F2Z2N8 137 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 H7C1C5 153 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 LINC01387J3KSC0 135 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 DNPH1O43598 174 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 IFNGR1P15260 489 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 CD53P19397 219 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 SHC1P29353 583 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 CRABP1P29762 137 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 GABRA5P31644 462 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 CD79BP40259 229 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 PEX19P40855 299 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 NAA10P41227 235 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-233ENST00000557529 GPR85P60893 370 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 LCN6P62502 163 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 POU3F1Q03052 451 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-233ENST00000557529 FOXO1Q12778 655 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 MFAP5Q13361 173 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 ATP1A1-AS1Q5TC04 95 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 ZBTB46Q86UZ6 589 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 KLBQ86Z14 1044 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 EGFL6Q8IUX8 553 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 CPAMD8Q8IZJ3 1885 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 OR6V1Q8N148 313 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 OR2M7Q8NG81 312 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 ZFAND2BQ8WV99 257 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 ZNRF4Q8WWF5 429 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 KLHL15Q96M94 604 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 OXGR1Q96P68 337 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 TSSK2Q96PF2 358 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 COQ7Q99807 217 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 NAA11Q9BSU3 229 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-233ENST00000557529 NUAK2Q9H093 628 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 DCSTAMPQ9H295 470 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 EXOSC4Q9NPD3 245 aaKnown RBP11.19□□□□□ -0.62
SHMT2-233ENST00000557529 B9D1Q9UPM9 204 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 RASD1Q9Y272 281 aa11.19□□□□□ -0.62
SHMT2-233ENST00000557529 ZNF891A8MT65 544 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-233ENST00000557529 CENPBD1B2RD01 187 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 NKX2-8O15522 239 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 SELENOFO60613 162 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 GPX5O75715 221 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 F10P00742 488 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 OPN1LWP04000 364 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 HLA-DOBP13765 273 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 GDF1P27539 372 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 CRYBB2P43320 205 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 P2RY4P51582 365 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 B3GALT5-AS1P59052 145 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 RPS3AP61247 264 aaKnown RBP11.18□□□□□ -0.62
SHMT2-233ENST00000557529 DBPQ10586 325 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-233ENST00000557529 MELKQ14680 651 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 CDONQ4KMG0 1287 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 TMEM225Q6GV28 225 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 SLC25A25Q6KCM7 469 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 VASH1Q7L8A9 365 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-233ENST00000557529 KDM8Q8N371 416 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 ZNF511Q8NB15 262 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 MDS2Q8NDY4 140 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 FAM83FQ8NEG4 500 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-233ENST00000557529 DYNC2LI1Q8TCX1 351 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 SNX33Q8WV41 574 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 C4orf36Q96KX1 117 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 SFXN2Q96NB2 322 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms