RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 RFTN2Q52LD8 501 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 LRRC23Q53EV4 343 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 PDLIM3Q53GG5 364 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 PRR31Q5SQ13 230 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 STEAP3Q658P3 488 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 KRT80Q6KB66 452 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 CCBE1Q6UXH8 406 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 DEF8Q6ZN54 512 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 TIFABQ6ZNK6 161 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 OLIG3Q7RTU3 272 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 ZCCHC24Q8N2G6 241 aaKnown RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 DPP10Q8N608 796 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 OR7A2PQ8NGA2 310 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 OR56A1Q8NGH5 318 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 OR5D16Q8NGK9 328 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 FAM216AQ8WUB2 273 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 TMEM234Q8WY98 164 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 PPP1R14BQ96C90 147 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 ZHX1-C8orf76Q96EF9 292 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 METTL2AQ96IZ6 378 aaKnown RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 FCRL1Q96LA6 429 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 SH3GL1Q99961 368 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 KCNS3Q9BQ31 491 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 C1orf43Q9BWL3 253 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 NMUR2Q9GZQ4 415 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 RAB1BQ9H0U4 201 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 SEC61A2Q9H9S3 476 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 SNTG1Q9NSN8 517 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 ACER3Q9NUN7 267 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 UPB1Q9UBR1 384 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 CHRNA9Q9UGM1 479 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 LAMP5Q9UJQ1 280 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 EMCNQ9ULC0 261 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 FAF1Q9UNN5 650 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 SLC9A8Q9Y2E8 581 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 EXOC1LA0A1B0GW35 172 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SAC3D1A6NKF1 404 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 NUDT19A8MXV4 375 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 FAM25EA8MYX2 175 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 TMEM233B4DJY2 109 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 B4DSR2 109 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 LYNX1G3V0Z9 82 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 hCG_2039718K7EN88 272 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 F2RL2O00254 374 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SLC28A1O00337 649 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 LSM1O15116 133 aaKnown RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SCAMP2O15127 329 aaKnown RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 FCMRO60667 390 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 NOL3O60936 208 aaKnown RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 C6orf47O95873 294 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 PNPP00491 289 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 CRYAAP02489 173 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 KRT16P08779 473 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 IGFBP1P08833 259 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 LINC00032P0C843 101 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 CECR9P0C854 216 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 LYNX1P0DP58 116 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 UROSP10746 265 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 MYL2P10916 166 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 LAMP1P11279 417 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 BCKDHAP12694 445 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 CREB1P16220 341 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 CCNA2P20248 432 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 PCMT1P22061 227 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 ECHS1P30084 290 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 CALCRP30988 508 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 RYKP34925 604 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 APOBEC1P41238 236 aaKnown RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SLC1A3P43003 542 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 OR2B6P58173 313 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 HILS1P60008 231 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 TUBA1BP68363 451 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 TUBA4AP68366 448 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 NAAAQ02083 359 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 TEKQ02763 1124 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SLC17A1Q14916 467 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 TBRG1Q3YBR2 411 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SPDYE7PQ495Y7 208 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 GALNTL6Q49A17 601 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 AWAT1Q58HT5 328 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 LIPMQ5VYY2 423 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 C8orf74Q6P047 294 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 ZYG11AQ6WRX3 759 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 TUBA1AQ71U36 451 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 PEG10Q86TG7 708 aaKnown RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 GLCCI1Q86VQ1 547 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 ADGRG3Q86Y34 549 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 PEX5LQ8IYB4 626 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF786Q8N393 782 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SVOPLQ8N434 492 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 ZIC4Q8N9L1 334 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 ZBTB8BQ8NAP8 495 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 FAM71CQ8NEG0 241 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 OR5AK3PQ8NH89 298 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 PSMA8Q8TAA3 256 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF418Q8TF45 676 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 WDR60Q8WVS4 1066 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 NEU4Q8WWR8 484 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SPSB4Q96A44 273 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 TMEM45BQ96B21 275 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms