RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CD40P25942 277 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 CSNK1A1P48729 337 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 VLDLRP98155 873 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 C1QTNF12Q5T7M4 302 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 TBPL2Q6SJ96 375 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 MBOAT2Q6ZWT7 520 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 TRPM8Q7Z2W7 1104 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 LURAP1LQ8IV03 231 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-217ENST00000556203 LILRB1Q8NHL6 650 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-217ENST00000556203 MAGEE2Q8TD90 523 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-217ENST00000556203 C7orf34Q96L11 122 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 ALPK1Q96QP1 1244 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 ULBP2Q9BZM5 246 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 NELFAQ9H3P2 528 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 ANKRD19PQ9H560 264 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 INIPQ9NRY2 104 aa13.29□□□□□ -0.28
ACTN1-217ENST00000556203 BEX4Q9NWD9 120 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-217ENST00000556203 PRR14LQ5THK1 2151 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 ARPC4-TTLL3A0A0A6YYG9 625 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 A0A1W2PRG6 482 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 ZNF99A8MXY4 864 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-217ENST00000556203 SHISA9B4DS77 424 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 PDE5AO76074 875 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 DIRAS1O95057 198 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 SEMG1P04279 462 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 SAGP10523 405 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-217ENST00000556203 ITGA2P17301 1181 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 TUBA1BP68363 451 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 TUBA4AP68366 448 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 PRKCDQ05655 676 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 SPOCK1Q08629 439 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 LAPTM4AQ15012 233 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 ZNF672Q499Z4 452 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-217ENST00000556203 PODNL1Q6PEZ8 512 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 TUBA1AQ71U36 451 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 RNF113BQ8IZP6 322 aaKnown RBP13.28□□□□□ -0.28
ACTN1-217ENST00000556203 ARHGAP24Q8N264 748 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 ZNF611Q8N823 705 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 TMEM54Q969K7 222 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 PIGTQ969N2 578 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 ZNF566Q969W8 418 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 MCUR1Q96AQ8 359 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 SLC25A44Q96H78 314 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-217ENST00000556203 PIP5K1AQ99755 562 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 CXXC4Q9H2H0 198 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 GLTPQ9NZD2 209 aa13.28□□□□□ -0.28
ACTN1-217ENST00000556203 CCDC168Q8NDH2 2452 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 A0A1W2PRQ8 180 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 EFCAB9A8MZ26 197 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 MCIDASD6RGH6 385 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 SEC14L2O76054 403 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 IGHG1P01857 330 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 TSPAN19P0C672 248 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 ATP6V1B2P21281 511 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 GPR4P46093 362 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 DAP3P51398 398 aaKnown RBP13.27□□□□□ -0.29
ACTN1-217ENST00000556203 CDH11P55287 796 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 RUNX1T1Q06455 604 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 DGCR6Q14129 220 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 ALG10Q5BKT4 473 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 FGD3Q5JSP0 725 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 SLC22A25Q6T423 547 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 CYP2R1Q6VVX0 501 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 RRM2BQ7LG56 351 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 CDK20Q8IZL9 346 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 OR51A7Q8NH64 312 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 SLC7A13Q8TCU3 470 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 FBXW5Q969U6 566 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 RADILQ96JH8 1075 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 MGAT4BQ9UQ53 548 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 POFUT2Q9Y2G5 429 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 HIF3AQ9Y2N7 669 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 LRBAP50851 2863 aa13.27□□□□□ -0.29
ACTN1-217ENST00000556203 TRAV27A0A087WT01 109 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 SMPD2O60906 423 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 UBOX5O94941 541 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 FABP3P05413 133 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 PGA4P0DJD7 388 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 PGA3P0DJD8 388 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 HOXB1P14653 301 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-217ENST00000556203 RPS4XP62701 263 aaKnown RBP13.26□□□□□ -0.29
ACTN1-217ENST00000556203 SPIBQ01892 262 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 IQCCQ4KMZ1 466 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 SPNS3Q6ZMD2 512 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 ZNF813Q6ZN06 617 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 HDDC2Q7Z4H3 204 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 OAFQ86UD1 273 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 OR13C2Q8NGS9 318 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 OR52J3Q8NH60 311 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 ASB10Q8WXI3 467 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 DHRS1Q96LJ7 313 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 FOXB1Q99853 325 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 C1orf21Q9H246 121 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 TAS2R1Q9NYW7 299 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 CISD1Q9NZ45 108 aaKnown RBP13.26□□□□□ -0.29
ACTN1-217ENST00000556203 ACTR3BQ9P1U1 418 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 POU2F3Q9UKI9 436 aa13.26□□□□□ -0.29
ACTN1-217ENST00000556203 PRPF19Q9UMS4 504 aaKnown RBP13.26□□□□□ -0.29
ACTN1-217ENST00000556203 IGHV1-18A0A0C4DH31 117 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms