RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 SEC14L4Q9UDX3 406 aa8.86□□□□□ -0.99
PSEN1-213ENST00000555386 ZNF835Q9Y2P0 537 aa8.86□□□□□ -0.99
PSEN1-213ENST00000555386 USP9XQ93008 2570 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-213ENST00000555386 SPTAN1Q13813 2472 aaKnown RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 LRRK2Q5S007 2527 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 CACNA1CQ13936 2221 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 A0A087WUU8 490 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 LOC100506127A0A0U1RQW1 187 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 OR14I1A6ND48 311 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 TNFSF11O14788 317 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 MYL12BO14950 172 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 PRODHO43272 600 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 UPK1BO75841 260 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 RAB36O95755 333 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 ACTL6AO96019 429 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 PTNP21246 168 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 FPR3P25089 353 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 PSMA1P25786 263 aaKnown RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 SHC1P29353 583 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 GRK5P34947 590 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 SUCLG1P53597 346 aaKnown RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 PMPCAQ10713 525 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 RAB40BQ12829 278 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 KRR1Q13601 381 aaKnown RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 TMEM176BQ3YBM2 270 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 SYT14P1Q58G82 188 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 PLEKHG7Q6ZR37 379 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 PLEKHM3Q6ZWE6 761 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 RRM2BQ7LG56 351 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 ZNF550Q7Z398 422 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 BTLAQ7Z6A9 289 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 ZNF440Q8IYI8 595 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 GTPBP8Q8N3Z3 284 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 MEIOBQ8N635 442 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 CLDN22Q8N7P3 220 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 TMEM163Q8TC26 289 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 ACOT11Q8WXI4 607 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 TMEM234Q8WY98 164 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 OSTF1Q92882 214 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 ITPKCQ96DU7 683 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 CHCHD6Q9BRQ6 235 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 TP63Q9H3D4 680 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 SP140LQ9H930 580 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 FGF20Q9NP95 211 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 EXOSC3Q9NQT5 275 aaKnown RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 NDUFB11Q9NX14 153 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 TVP23BQ9NYZ1 205 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 CRNNQ9UBG3 495 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 RPS6KB2Q9UBS0 482 aa8.85□□□□□ -0.99
PSEN1-213ENST00000555386 TESQ9UGI8 421 aaKnown RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 ERRFI1Q9UJM3 462 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 MRPS18CQ9Y3D5 142 aaKnown RBP8.85□□□□□ -0.99
PSEN1-213ENST00000555386 A0A1W2PNR3 127 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 TMEM129A0AVI4 362 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 FIGNL2A6NMB9 653 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 TLX2O43763 284 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-213ENST00000555386 EFNA2O43921 213 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 PRKYO43930 277 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 IGFBP1P08833 259 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-213ENST00000555386 ADRA2AP08913 450 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 ZNF17P17021 662 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 TACR3P29371 465 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 TGFBR1P36897 503 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 EIF1P41567 113 aaKnown RBP8.84□□□□□ -0.99
PSEN1-213ENST00000555386 ACAA2P42765 397 aaKnown RBP8.84□□□□□ -0.99
PSEN1-213ENST00000555386 EIF1AXP47813 144 aaKnown RBP8.84□□□□□ -0.99
PSEN1-213ENST00000555386 CLDN18P56856 261 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 SSX1Q16384 188 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 SNAPC1Q16533 368 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 SGCBQ16585 318 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 GLYR1Q49A26 553 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-213ENST00000555386 C1orf185Q5T7R7 199 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 ZNF730Q6ZMV8 503 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 P4HA3Q7Z4N8 544 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 PM20D2Q8IYS1 436 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 ANKK1Q8NFD2 765 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 OIT3Q8WWZ8 545 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 ST8SIA1Q92185 356 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 ZNF845Q96IR2 970 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-213ENST00000555386 LRR1Q96L50 414 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 MRGPRX4Q96LA9 322 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 ZNF582Q96NG8 517 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-213ENST00000555386 CENPOQ9BU64 300 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 TAS2R16Q9NYV7 291 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 STUB1Q9UNE7 303 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 SLC5A6Q9Y289 635 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 MEMO1Q9Y316 297 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 EXOSC1Q9Y3B2 195 aaKnown RBP8.84□□□□□ -0.99
PSEN1-213ENST00000555386 ICE1Q9Y2F5 2266 aa8.84□□□□□ -0.99
PSEN1-213ENST00000555386 UTP20O75691 2785 aaKnown RBP8.84□□□□□ -0.99
PSEN1-213ENST00000555386 TMED7-TICAM2A0A0A6YYA0 188 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 A0A1B0GUH1 482 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CPSF4LA6NMK7 179 aaKnown RBP8.83□□□□□ -1
PSEN1-213ENST00000555386 LOC110117498-PIK3R3F6TDL0 507 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 KLF4O43474 513 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CXCL13O43927 109 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 FMO6PO60774 539 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 ZG16O60844 167 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 ZNF708P17019 499 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms