RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TRIM49D1C9J1S8 452 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PRYO14603 147 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 AP3D1O14617 1153 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 EIF3HO15372 352 aaKnown RBP eCLIP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 UPK3AO75631 287 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 UGT2B17O75795 530 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 SUPT7LO94864 414 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 SYNGR4O95473 234 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 HMGN2P05204 90 aaKnown RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 ANXA4P09525 319 aaPredicted RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CECR9P0C854 216 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 LAMP1P11279 417 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PRPS2P11908 318 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 FCGR2AP12318 317 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 SDC1P18827 310 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 GGT1P19440 569 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PGCP20142 388 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 BTF3P20290 206 aaKnown RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 GIFP27352 417 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 TYK2P29597 1187 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 GCKP35557 465 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PGM1P36871 562 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 SOX2P48431 317 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PDLIM4P50479 330 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 P2RX1P51575 399 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 LMO4P61968 165 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PHEXP78562 749 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF763Q0D2J5 394 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 IFT88Q13099 833 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 SKP2Q13309 424 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PDE7AQ13946 482 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 FGFBP1Q14512 234 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 LASP1Q14847 261 aaKnown RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 QPRTQ15274 297 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 UAP1Q16222 522 aaPredicted RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CARTPTQ16568 116 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 DECR1Q16698 335 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PIK3CD-AS1Q5SR53 167 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 FBXW9Q5XUX1 488 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CLEC6AQ6EIG7 209 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF544Q6NX49 715 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 NOXRED1Q6NXP6 359 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CDC73Q6P1J9 531 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 BHLHB9Q6PI77 547 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 TMPPEQ6ZT21 453 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PAGE2Q7Z2X7 111 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 SVOPLQ8N434 492 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 SPATA4Q8NEY3 305 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 OR7A2PQ8NGA2 310 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CLDND2Q8NHS1 167 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 RFWD2Q8NHY2 731 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CDC26Q8NHZ8 85 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 FGFBP3Q8TAT2 258 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 GPR151Q8TDV0 419 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 C22orf15Q8WYQ4 148 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 GTF3AQ92664 365 aaKnown RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CPNE4Q96A23 557 aaPredicted RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 LRRC58Q96CX6 371 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 ERP27Q96DN0 273 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 RADILQ96JH8 1075 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 C3orf30Q96M34 536 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 ADAD1Q96M93 576 aaKnown RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 TSSK3Q96PN8 268 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 DUX5Q96PT3 197 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 TSPAN32Q96QS1 320 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 OR5B2Q96R09 309 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 BBS4Q96RK4 519 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF382Q96SR6 550 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CENPKQ9BS16 269 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PIMREGQ9BSJ6 248 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 THUMPD3Q9BV44 507 aaKnown RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CCDC106Q9BWC9 280 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 SF3B5Q9BWJ5 86 aaKnown RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 FAIM2Q9BWQ8 316 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CDC42EP4Q9H3Q1 356 aaKnown RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 TPK1Q9H3S4 243 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PLK3Q9H4B4 646 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 NARFLQ9H6Q4 476 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 PTGES2Q9H7Z7 377 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 LPAR2Q9HBW0 351 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 Q9N2J8 555 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 MYNNQ9NPC7 610 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 SDHAF3Q9NRP4 125 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 DDX18Q9NVP1 670 aaKnown RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 DCAF16Q9NXF7 216 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 AHSPQ9NZD4 102 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF224Q9NZL3 707 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CRNNQ9UBG3 495 aaPredicted RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 MALT1Q9UDY8 824 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 OPN4Q9UHM6 478 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 ZDHHC2Q9UIJ5 367 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 FLVCR1Q9Y5Y0 555 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 CACNG2Q9Y698 323 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 EPPK1P58107 5090 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 GNG14A0A1W2PPG7 69 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 LOC390937A0A1W2PQ73 354 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 SH3PXD2BA1X283 911 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 SYCE1LA8MT33 242 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PRSS47A8MTI9 375 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms