RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 IGHMP01871 453 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 FCGR2AP12318 317 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 MYF6P23409 242 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 FMO3P31513 532 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 CDKN2AP42771 156 aaKnown RBP12.55□□□□□ -0.4
PRKCH-206ENST00000553830 CLRN1P58418 232 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 CD47Q08722 323 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 IL18R1Q13478 541 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 ARMC4Q5T2S8 1044 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 PLBD1Q6P4A8 553 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 USP51Q70EK9 711 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 AAED1Q7RTV5 226 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 THAP5Q7Z6K1 395 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 CPOQ8IVL8 374 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 ENTHD1Q8IYW4 607 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 ARIH2OSQ8N7S6 290 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 ZNF519Q8TB69 540 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 HDAC2Q92769 488 aaKnown RBP12.55□□□□□ -0.4
PRKCH-206ENST00000553830 SF3B5Q9BWJ5 86 aaKnown RBP12.55□□□□□ -0.4
PRKCH-206ENST00000553830 ANKRD60Q9BZ19 345 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 CMC2Q9NRP2 79 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 EMC3Q9P0I2 261 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 PCDHGB5Q9Y5G0 923 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 ZZEF1O43149 2961 aa12.55□□□□□ -0.4
PRKCH-206ENST00000553830 INTS1Q8N201 2190 aaKnown RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 TRGV8A0A0C4DH27 118 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 A6NIZ1 184 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 FAM171A2A8MVW0 826 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 PRR23D1E9PI22 279 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 DENRO43583 198 aaKnown RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 AKAP8O43823 692 aaKnown RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 IDH3BO43837 385 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 WDR1O75083 606 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 TRMUO75648 421 aaKnown RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 SMNDC1O75940 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 GYPBP06028 91 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 PRR23D2P0DMB1 279 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 GABRA1P14867 456 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 ACADSP16219 412 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 CENPAP49450 140 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 SELENOPP49908 381 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 NUDT6P53370 316 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 SLC16A1P53985 500 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 PER3P56645 1201 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 RAP1BP61224 184 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 RAP1AP62834 184 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 LGALS3BPQ08380 585 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 ITGADQ13349 1161 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 MED21Q13503 144 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 MAD2L1BPQ15013 274 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 RNPS1Q15287 305 aaKnown RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 POU4F3Q15319 338 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 SF3B4Q15427 424 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 KLHL12Q53G59 568 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 TMEM201Q5SNT2 666 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 RTL6Q6ICC9 239 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 CXXC5Q7LFL8 322 aaKnown RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 CNEP1R1Q8N9A8 125 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 ZIC4Q8N9L1 334 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 BBS1Q8NFJ9 593 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 TMEM163Q8TC26 289 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 INTS12Q96CB8 462 aaKnown RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 FOXN4Q96NZ1 517 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 BBC3Q96PG8 261 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 OR51V1Q9H2C8 321 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 C12orf49Q9H741 205 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 HINT3Q9NQE9 182 aaKnown RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 RPRD1BQ9NQG5 326 aaKnown RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 UBAP1Q9NZ09 502 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 ING1Q9UK53 422 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 NOSIPQ9Y314 301 aaKnown RBP12.54□□□□□ -0.4
PRKCH-206ENST00000553830 LRRC42Q9Y546 428 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 FAM215AQ9Y5M1 114 aa12.54□□□□□ -0.4
PRKCH-206ENST00000553830 OR6C68A6NDL8 312 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 TXNDC12O95881 172 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 IGHV3-9P01782 118 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 IGHG1P01857 330 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 CLUP10909 449 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 APEHP13798 732 aaKnown RBP12.53□□□□□ -0.4
PRKCH-206ENST00000553830 PAICSP22234 425 aaKnown RBP12.53□□□□□ -0.4
PRKCH-206ENST00000553830 PYCR1P32322 319 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 RPS7P62081 194 aaKnown RBP12.53□□□□□ -0.4
PRKCH-206ENST00000553830 FMODQ06828 376 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 MRPL49Q13405 166 aaKnown RBP12.53□□□□□ -0.4
PRKCH-206ENST00000553830 PDK3Q15120 406 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 FAM205BPQ63HN1 556 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 NSUN5P2Q63ZY6 315 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 GTF2IRD2BQ6EKJ0 949 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 B3GNT6Q6ZMB0 384 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 NCCRP1Q6ZVX7 275 aaPredicted RBP12.53□□□□□ -0.4
PRKCH-206ENST00000553830 NUFIP2Q7Z417 695 aaKnown RBP12.53□□□□□ -0.4
PRKCH-206ENST00000553830 HDDC2Q7Z4H3 204 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 ADGRE4PQ86SQ3 457 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 GTF2IRD2Q86UP8 949 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 DOLPP1Q86YN1 238 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 ZNF786Q8N393 782 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 ST6GALNAC3Q8NDV1 305 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 NOXO1Q8NFA2 376 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 OR51L1Q8NGJ5 315 aa12.53□□□□□ -0.4
PRKCH-206ENST00000553830 OR8J1Q8NGP2 316 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms