RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SETD6Q8TBK2 473 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 RNF133Q8WVZ7 376 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 MAP6Q96JE9 813 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 SLC25A18Q9H1K4 315 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 COPS7BQ9H9Q2 264 aaPredicted RBP4.34□□□□□ -1.71
SCAF11-212ENST00000549162 ADGRL4Q9HBW9 690 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 CIDEBQ9UHD4 219 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 RPL36Q9Y3U8 105 aaKnown RBP4.34□□□□□ -1.71
SCAF11-212ENST00000549162 A0A087WXM4 84 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 SNTNA6NMZ2 147 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 PRKYO43930 277 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 STK17BO94768 372 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 PRF1P14222 555 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 BAK1Q16611 211 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 TIGD2Q4W5G0 525 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 PLA1AQ53H76 456 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 OR2A2Q6IF42 318 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 LINGO2Q7L985 606 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 FAM89BQ8N5H3 189 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 OR9I1Q8NGQ6 314 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 ST7LQ8TDW4 575 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 C15orf40Q8WUR7 153 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 FAR1Q8WVX9 515 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 ERGIC1Q969X5 290 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 PYCR2Q96C36 320 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 C16orf58Q96GQ5 468 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 TMEM80Q96HE8 168 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 PGLYRP3Q96LB9 341 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 GPR137Q96N19 417 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 MUS81Q96NY9 551 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 SFXN3Q9BWM7 321 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 CHODLQ9H9P2 273 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 CHST11Q9NPF2 352 aa4.34□□□□□ -1.71
SCAF11-212ENST00000549162 REV3LO60673 3130 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 UNC119BA6NIH7 251 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 SAC3D1A6NKF1 404 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 H0YHG0 523 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 PDGFBP01127 241 aaPredicted RBP4.34□□□□□ -1.72
SCAF11-212ENST00000549162 TFAP2AP05549 437 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 CD14P08571 375 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 GABRA1P14867 456 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 SLC6A6P31641 620 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 GABRA5P31644 462 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 ETV5P41161 510 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 MC3RP41968 323 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 RPL5P46777 297 aaKnown RBP4.34□□□□□ -1.72
SCAF11-212ENST00000549162 SSR4P51571 173 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 FOXF1Q12946 379 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 MAPK14Q16539 360 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 CPSF6Q16630 551 aaKnown RBP eCLIP4.34□□□□□ -1.72
SCAF11-212ENST00000549162 ELFN2Q5R3F8 820 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 FAM71F2Q6NXP2 309 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.34□□□□□ -1.72
SCAF11-212ENST00000549162 ERI1Q8IV48 349 aaKnown RBP4.34□□□□□ -1.72
SCAF11-212ENST00000549162 TRIM48Q8IWZ4 208 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 CCNYL1Q8N7R7 359 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 GRHL3Q8TE85 626 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 TMEM239Q8WW34 195 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 WDYHV1Q96HA8 205 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 NAF1Q96HR8 494 aaKnown RBP4.34□□□□□ -1.72
SCAF11-212ENST00000549162 GMPPAQ96IJ6 420 aaPredicted RBP4.34□□□□□ -1.72
SCAF11-212ENST00000549162 C7orf50Q9BRJ6 194 aaKnown RBP4.34□□□□□ -1.72
SCAF11-212ENST00000549162 ATG10Q9H0Y0 220 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 ABCG5Q9H222 651 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF552Q9H707 407 aaPredicted RBP4.34□□□□□ -1.72
SCAF11-212ENST00000549162 OCIAD1Q9NX40 245 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 SLC2A8Q9NY64 477 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 COMMD3-BMI1R4GMX3 469 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 X6R8D5 127 aa4.34□□□□□ -1.72
SCAF11-212ENST00000549162 TMEM72A0PK05 275 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 OR5H15A6NDH6 313 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 IDSB3KWA1 339 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 C9J4A7 227 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 RRP8O43159 456 aaKnown RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 EFNA2O43921 213 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 TSPAN9O75954 239 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 PLATP00750 562 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 SP1P08047 785 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 OPRL1P41146 370 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 RGS6P49758 472 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 RIDAP52758 137 aaKnown RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 LTBQ06643 244 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 TFF3Q07654 80 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 RABL3Q5HYI8 236 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 LCN10Q6JVE6 187 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 MEPCEQ7L2J0 689 aaKnown RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF786Q8N393 782 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 IL17RDQ8NFM7 739 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 OR10Z1Q8NGY1 313 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 FBXO30Q8TB52 745 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 SLC7A13Q8TCU3 470 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 UQCC2Q9BRT2 126 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 KLHL28Q9NXS3 571 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 PADI1Q9ULC6 663 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 CACNA1EQ15878 2313 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 TRABD2BA6NFA1 517 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 SLC1A7O00341 560 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 UPK3AO75631 287 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 NDUFB2O95178 105 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 IGKV3-15P01624 115 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms