RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 SLC46A3Q7Z3Q1 461 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 NUFIP2Q7Z417 695 aaKnown RBP11.83□□□□□ -0.52
RAB5B-203ENST00000546810 PXKQ7Z7A4 578 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 ZNF610Q8N9Z0 462 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 ANKK1Q8NFD2 765 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 OR4K5Q8NGD3 323 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 TMEM45BQ96B21 275 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 APH1AQ96BI3 265 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 GSX2Q9BZM3 304 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 OPN3Q9H1Y3 402 aaPredicted RBP11.83□□□□□ -0.52
RAB5B-203ENST00000546810 UBTD1Q9HAC8 227 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 C20orf141Q9NUB4 165 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 ELOVL5Q9NYP7 299 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 SEC14L4Q9UDX3 406 aa11.83□□□□□ -0.52
RAB5B-203ENST00000546810 SH3PXD2BA1X283 911 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 OR6C65A6NJZ3 312 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 MS4A18H0YCH9 400 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 PHF1O43189 567 aaPredicted RBP11.82□□□□□ -0.52
RAB5B-203ENST00000546810 WIPF1O43516 503 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 RNF13O43567 381 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 OR10H3O60404 316 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 FKBP6O75344 327 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 OR3A2P47893 321 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 PTH2RP49190 550 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 ERFP50548 548 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 HMGA2P52926 109 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 MS4A18Q3C1V0 323 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 TBPL2Q6SJ96 375 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 TFAP2EQ6VUC0 442 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 TMPRSS11FQ6ZWK6 438 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 OAFQ86UD1 273 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 LSRQ86X29 649 aaPredicted RBP11.82□□□□□ -0.52
RAB5B-203ENST00000546810 KDM8Q8N371 416 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 LRRC17Q8N6Y2 441 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 PAPD5Q8NDF8 572 aaKnown RBP11.82□□□□□ -0.52
RAB5B-203ENST00000546810 UTP4Q969X6 686 aaKnown RBP11.82□□□□□ -0.52
RAB5B-203ENST00000546810 GALNT8Q9NY28 637 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 UPB1Q9UBR1 384 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 RCE1Q9Y256 329 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 SAMHD1Q9Y3Z3 626 aaKnown RBP11.82□□□□□ -0.52
RAB5B-203ENST00000546810 LYVE1Q9Y5Y7 322 aa11.82□□□□□ -0.52
RAB5B-203ENST00000546810 CUBNO60494 3623 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 FREM3P0C091 2139 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 A0A1W2PRG6 482 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 ZNF726A6NNF4 738 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 C11orf98E9PRG8 122 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 KRT33AO76009 404 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 CCNB2O95067 398 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 POU2F1P14859 743 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 MAKP20794 623 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 FUT4P22083 530 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 GPR4P46093 362 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 PCYT1AP49585 367 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 ARHGDIAP52565 204 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 CLDN17P56750 224 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 PRPS1P60891 318 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 POU3F1Q03052 451 aaPredicted RBP11.81□□□□□ -0.52
RAB5B-203ENST00000546810 EXOC3L2Q2M3D2 409 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 NIPAL3Q6P499 406 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 HDDC2Q7Z4H3 204 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 ABHD12BQ7Z5M8 362 aaPredicted RBP11.81□□□□□ -0.52
RAB5B-203ENST00000546810 EPHX4Q8IUS5 362 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 UBE2J2Q8N2K1 259 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 FAM46AQ96IP4 442 aaKnown RBP11.81□□□□□ -0.52
RAB5B-203ENST00000546810 FUZQ9BT04 418 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 TAS2R5Q9NYW4 299 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 B3GAT1Q9P2W7 334 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 DNAJB9Q9UBS3 223 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 NDRG3Q9UGV2 375 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 HIF3AQ9Y2N7 669 aa11.81□□□□□ -0.52
RAB5B-203ENST00000546810 SLC43A1O75387 559 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 DEAF1O75398 565 aaPredicted RBP11.8□□□□□ -0.52
RAB5B-203ENST00000546810 E2F6O75461 281 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 SERPINI2O75830 405 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 FCGR1AP12314 374 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 CD79BP40259 229 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 OMPP47874 163 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 LIMS1P48059 325 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 ACTR3P61158 418 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 LSM11P83369 360 aaKnown RBP eCLIP11.8□□□□□ -0.52
RAB5B-203ENST00000546810 RPL18Q07020 188 aaKnown RBP11.8□□□□□ -0.52
RAB5B-203ENST00000546810 CCNIQ14094 377 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 P2RY6Q15077 328 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 SEC23BQ15437 767 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 ZBED5Q49AG3 693 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 ALG10Q5BKT4 473 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 FBXW9Q5XUX1 488 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 ZNF474Q6S9Z5 364 aaPredicted RBP11.8□□□□□ -0.52
RAB5B-203ENST00000546810 C20orf204Q6ZNR8 217 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 Q6ZT83 130 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 HIPK1Q86Z02 1210 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 ZIC4Q8N9L1 334 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 POMGNT2Q8NAT1 580 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 GNPDA2Q8TDQ7 276 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 DUS3LQ96G46 650 aaKnown RBP11.8□□□□□ -0.52
RAB5B-203ENST00000546810 ADAD1Q96M93 576 aaKnown RBP11.8□□□□□ -0.52
RAB5B-203ENST00000546810 ZNF385AQ96PM9 386 aaKnown RBP11.8□□□□□ -0.52
RAB5B-203ENST00000546810 HDHD5Q9BXW7 423 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 INIPQ9NRY2 104 aa11.8□□□□□ -0.52
RAB5B-203ENST00000546810 ARMC1Q9NVT9 282 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms