RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 REEP1Q9H902 201 aa14.81□□□□□ -0.04
LTBR-215ENST00000546296 ANKHD1Q8IWZ3 2542 aaKnown RBP14.8□□□□□ -0.04
LTBR-215ENST00000546296 TCRBV3S1A0A5B6 114 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 UNC119BA6NIH7 251 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 PDLIM1O00151 329 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 CST1P01037 141 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 THBDP07204 575 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 TSPAN19P0C672 248 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 HOXC12P31275 282 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 RPL4P36578 427 aaKnown RBP14.8□□□□□ -0.04
LTBR-215ENST00000546296 CSNK1A1P48729 337 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 HMGA2P52926 109 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 CTXN1P60606 82 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 PRPS1P60891 318 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 TOP3AQ13472 1001 aaPredicted RBP14.8□□□□□ -0.04
LTBR-215ENST00000546296 GABRA6Q16445 453 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 ACKR1Q16570 336 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 HDDC2Q7Z4H3 204 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 IGFN1Q86VF2 1251 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 P2RY8Q86VZ1 359 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 LINC00471Q8N535 108 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 GNPDA2Q8TDQ7 276 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 ZNF566Q969W8 418 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 SLC25A44Q96H78 314 aaPredicted RBP14.8□□□□□ -0.04
LTBR-215ENST00000546296 LRR1Q96L50 414 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 CRLF2Q9HC73 371 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 GPR35Q9HC97 309 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 SAMHD1Q9Y3Z3 626 aaKnown RBP14.8□□□□□ -0.04
LTBR-215ENST00000546296 LYVE1Q9Y5Y7 322 aa14.8□□□□□ -0.04
LTBR-215ENST00000546296 OR5H1A6NKK0 313 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 CCNB2O95067 398 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 IGHG1P01857 330 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 CRYGSP22914 178 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 CLRN1P58418 232 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 RPS4XP62701 263 aaKnown RBP14.79□□□□□ -0.04
LTBR-215ENST00000546296 PPP1R8Q12972 351 aaKnown RBP14.79□□□□□ -0.04
LTBR-215ENST00000546296 PPA1Q15181 289 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 TAB1Q15750 504 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 TIMM23BQ5SRD1 257 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 LINGO2Q7L985 606 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 ZER1Q7Z7L7 766 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 WDFY1Q8IWB7 410 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 C1orf162Q8NEQ5 155 aaPredicted RBP14.79□□□□□ -0.04
LTBR-215ENST00000546296 MUS81Q96NY9 551 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 ULBP2Q9BZM5 246 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 TXNIPQ9H3M7 391 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 NGBQ9NPG2 151 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 PKDREJQ9NTG1 2253 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 STX18Q9P2W9 335 aaKnown RBP14.79□□□□□ -0.04
LTBR-215ENST00000546296 U3KQV3 271 aa14.79□□□□□ -0.04
LTBR-215ENST00000546296 DCHS2Q6V1P9 2916 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 FKBP6O75344 327 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 CTAG2O75638 210 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 LIMS1P48059 325 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 SH3BGRP55822 239 aaPredicted RBP14.78□□□□□ -0.04
LTBR-215ENST00000546296 ARF1P84077 181 aaKnown RBP14.78□□□□□ -0.04
LTBR-215ENST00000546296 CEACAM16Q2WEN9 425 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 PHYHD1Q5SRE7 291 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 KLHL24Q6TFL4 600 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 OR4C15Q8NGM1 316 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 OR52N5Q8NH56 324 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 ASB10Q8WXI3 467 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 PIK3IP1Q96FE7 263 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 GPA33Q99795 319 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 POLDIP3Q9BY77 421 aaKnown RBP14.78□□□□□ -0.04
LTBR-215ENST00000546296 RASSF1Q9NS23 344 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 CCM2LQ9NUG4 571 aaPredicted RBP14.78□□□□□ -0.04
LTBR-215ENST00000546296 GLTPQ9NZD2 209 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 ZNF346Q9UL40 294 aaKnown RBP14.78□□□□□ -0.04
LTBR-215ENST00000546296 POFUT2Q9Y2G5 429 aa14.78□□□□□ -0.04
LTBR-215ENST00000546296 RPL36A-HNRNPH2H7BZ11 118 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 PTP4A3O75365 173 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 NDUFB2O95178 105 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 GOSR1O95249 250 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 ACADSP16219 412 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 ACVR1BP36896 505 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 RPL27P61353 136 aaKnown RBP14.77□□□□□ -0.05
LTBR-215ENST00000546296 ERVK-25P63136 954 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 FHL1Q13642 323 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 MICAQ29983 383 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 HIKESHIQ53FT3 197 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 C1orf94Q6P1W5 598 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 PGBD2Q6P3X8 592 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 ANKRD16Q6P6B7 361 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 SSX8Q7RTT4 187 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 C17orf78Q8N4C9 275 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 LRRC75AQ8NAA5 344 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 SYT14Q8NB59 555 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 OR1K1Q8NGR3 316 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 TMEM54Q969K7 222 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 KATNB1Q9BVA0 655 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 CLEC4MQ9H2X3 399 aaPredicted RBP14.77□□□□□ -0.05
LTBR-215ENST00000546296 SLC17A5Q9NRA2 495 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 VNN3Q9NY84 501 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 GRHPRQ9UBQ7 328 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 SIGLEC7Q9Y286 467 aa14.77□□□□□ -0.05
LTBR-215ENST00000546296 FREM1Q5H8C1 2179 aa14.76□□□□□ -0.05
LTBR-215ENST00000546296 A0A096LPE4 126 aa14.76□□□□□ -0.05
LTBR-215ENST00000546296 A0A1W2PPZ6 126 aa14.76□□□□□ -0.05
LTBR-215ENST00000546296 A0A1W2PR80 420 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms