RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 OR8K3Q8NH51 312 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 ZNF417Q8TAU3 575 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 FGF13Q92913 245 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 SLC25A28Q96A46 364 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 CCDC74AQ96AQ1 378 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 USB1Q9BQ65 265 aaKnown RBP12.94□□□□□ -0.34
SRP54-202ENST00000546080 ZNF471Q9BX82 626 aaPredicted RBP12.94□□□□□ -0.34
SRP54-202ENST00000546080 PRDM9Q9NQV7 894 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 POLE3Q9NRF9 147 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 TMEM82A0PJX8 343 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 OR5H14A6NHG9 310 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 ZNF860A6NHJ4 632 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 H0YC42 278 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 UPK3AO75631 287 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 OR2F2O95006 317 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 ITGB2P05107 769 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 PPIAP62937 165 aaKnown RBP12.94□□□□□ -0.34
SRP54-202ENST00000546080 HTRA4P83105 476 aaPredicted RBP12.94□□□□□ -0.34
SRP54-202ENST00000546080 SCRN3Q0VDG4 424 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 OR2F1Q13607 317 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 ZNF345Q14585 488 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 HFEQ30201 348 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 LINC01590Q5TEZ4 76 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 ULK3Q6PHR2 472 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 KIRREL2Q6UWL6 708 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 RAB11FIP2Q7L804 512 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 SLC16A9Q7RTY1 509 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 OR2W3Q7Z3T1 314 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 BOLLQ8N9W6 283 aaKnown RBP12.94□□□□□ -0.34
SRP54-202ENST00000546080 ZNF511Q8NB15 262 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 EDAQ92838 391 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 PHYHIPLQ96FC7 376 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 RBM18Q96H35 190 aaKnown RBP12.94□□□□□ -0.34
SRP54-202ENST00000546080 ZNF75AQ96N20 296 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 VRK1Q99986 396 aaPredicted RBP12.94□□□□□ -0.34
SRP54-202ENST00000546080 COMMD4Q9H0A8 199 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 LMAN2LQ9H0V9 348 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 WDR13Q9H1Z4 485 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 ZDHHC4Q9NPG8 344 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 PHPT1Q9NRX4 125 aaPredicted RBP12.94□□□□□ -0.34
SRP54-202ENST00000546080 TMEM74BQ9NUR3 256 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 COMMD9Q9P000 198 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 MRM2Q9UI43 246 aaKnown RBP12.94□□□□□ -0.34
SRP54-202ENST00000546080 SLC22A7Q9Y694 548 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 H3BSH0 61 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 GPR31O00270 319 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 SCAMP1O15126 338 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 ARPC3O15145 178 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 CD8AP01732 235 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 GPR143P51810 404 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 TMEM88Q6PEY1 159 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 LINC00114Q6XXX2 140 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 SFTPA1Q8IWL2 248 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 GABRG1Q8N1C3 465 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 SVBPQ8N300 66 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 ZNF676Q8N7Q3 588 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 CLEC1AQ8NC01 280 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 OR4E2Q8NGC2 313 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 SUSD6Q92537 303 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 SMARCD2Q92925 531 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 TMEM106AQ96A25 262 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 LRRC3BQ96PB8 259 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 PDCD10Q9BUL8 212 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 POTEKPQ9BYX7 375 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 IKZF2Q9UKS7 526 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 TNFSF18Q9UNG2 199 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 KLHDC2Q9Y2U9 406 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 INSL6Q9Y581 213 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 DENND4AQ7Z401 1863 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 OR14I1A6ND48 311 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 SMAD9O15198 467 aaKnown RBP12.93□□□□□ -0.34
SRP54-202ENST00000546080 FGF17O60258 216 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 CDC40O60508 579 aaKnown RBP eCLIP12.93□□□□□ -0.34
SRP54-202ENST00000546080 SRPX2O60687 465 aaPredicted RBP12.93□□□□□ -0.34
SRP54-202ENST00000546080 KCNJ13O60928 360 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 SNRNP200O75643 2136 aaKnown RBP12.93□□□□□ -0.34
SRP54-202ENST00000546080 ZNF432O94892 652 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 WNT11O96014 354 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 PVALBP20472 110 aaPredicted RBP12.93□□□□□ -0.34
SRP54-202ENST00000546080 CSRP1P21291 193 aaKnown RBP12.93□□□□□ -0.34
SRP54-202ENST00000546080 POU3F4P49335 361 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 ACTBP60709 375 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 ACTG1P63261 375 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 UBE2IP63279 158 aaKnown RBP12.93□□□□□ -0.34
SRP54-202ENST00000546080 SNTB1Q13884 538 aaKnown RBP12.93□□□□□ -0.34
SRP54-202ENST00000546080 LIN54Q6MZP7 749 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 C11orf87Q6NUJ2 197 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 JAZF1Q86VZ6 243 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 ETFBKMTQ8IXQ9 262 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 OR5M8Q8NGP6 311 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 CD99L2Q8TCZ2 262 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 PXYLP1Q8TE99 480 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 DEC1Q9P2X7 70 aa12.93□□□□□ -0.34
SRP54-202ENST00000546080 ZNF346Q9UL40 294 aaKnown RBP12.93□□□□□ -0.34
SRP54-202ENST00000546080 TRBV5-7A0A0A0MS05 114 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 A0A1B0GTH9 108 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 URADA6NGE7 173 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 P2RX6O15547 441 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 MELTFP08582 738 aa12.92□□□□□ -0.34
SRP54-202ENST00000546080 CT62P0C5K7 136 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms