RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 A0A1W2PR48 441 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 PCDH17O14917 1159 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 VAMP5O95183 116 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 CBX7O95931 251 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TEAD1P28347 426 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 PPICP45877 212 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TMBIM6P55061 237 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 ERVK-16P61578 105 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 KEAP1Q14145 624 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC22A6Q4U2R8 563 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TIGD3Q6B0B8 471 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 MEPCEQ7L2J0 689 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 OR2A1Q8NGT9 310 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 C22orf15Q8WYQ4 148 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 CORO2AQ92828 525 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 NELFAQ9H3P2 528 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 RLIMQ9NVW2 624 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 CRYABP02511 175 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 GABRR1P24046 479 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 STOMP27105 288 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 APOBEC1P41238 236 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC6A12P48065 614 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 SUMO1P63165 101 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 SRSF5Q13243 272 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 SNTB2Q13425 540 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 DUSP5Q16690 384 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 COL28A1Q2UY09 1125 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF517Q6ZMY9 492 aaPredicted RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 DCXRQ7Z4W1 244 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 EXD3Q8N9H8 876 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 OR5J2Q8NH18 312 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 GABRG3Q99928 467 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 SYT4Q9H2B2 425 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 PAQR5Q9NXK6 330 aaPredicted RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 AHCTF1Q8WYP5 2266 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 CASP8AP2Q9UKL3 1982 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 RREB1Q92766 1687 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TRAV17A0A0B4J275 112 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 PMS2P1A4D2B8 440 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 H7C1C5 153 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 CELA3AP09093 270 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 NXPH1P58417 271 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 PSMA6P60900 246 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 LCN6P62502 163 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 BTG2P78543 158 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 FZD2Q14332 565 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 IL11RAQ14626 422 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 ODF1Q14990 250 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 ATXN7L3Q14CW9 347 aaPredicted RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 OGFRL1Q5TC84 451 aaPredicted RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TMEM207Q6UWW9 146 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 SCGB1C1Q8TD33 95 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TNFRSF13CQ96RJ3 184 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 SIDT1Q9NXL6 827 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 CCDC59Q9P031 241 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 MYEF2Q9P2K5 600 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 CHRNA9Q9UGM1 479 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 NDRG3Q9UGV2 375 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 PCDHGA10Q9Y5H3 936 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 ST14Q9Y5Y6 855 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 MCM3APO60318 1980 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 J3KTA2 159 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 COL9A1P20849 921 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 RPS23P62266 143 aaKnown RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 SRSF2Q01130 221 aaKnown RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 SELPLGQ14242 412 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 SAPCD1Q5SSQ6 148 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF684Q5T5D7 378 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 PLAG1Q6DJT9 500 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 DPY19L2P1Q6NXN4 242 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 MBOAT2Q6ZWT7 520 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 KCTD20Q7Z5Y7 419 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 LURAP1LQ8IV03 231 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 Q8N402 240 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 DTX3Q8N9I9 347 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC37A3Q8NCC5 494 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 OR2I1PQ8NGU4 316 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 TMEM163Q8TC26 289 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 TOMM40LQ969M1 308 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 MED18Q9BUE0 208 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF350Q9GZX5 532 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 A4GALTQ9NPC4 353 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 INPP5EQ9NRR6 644 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 RDH8Q9NYR8 311 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 MOKQ9UQ07 419 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 RHBDD3Q9Y3P4 386 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 SIPA1L3O60292 1781 aaPredicted RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 B4E171 279 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 OR2J2O76002 312 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 UQCRC1P31930 480 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 PRSS3P35030 304 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC1A3P43003 542 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 ESCO2Q56NI9 601 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 HES3Q5TGS1 186 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 H1FNTQ75WM6 255 aaPredicted RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 CAMKMTQ7Z624 323 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 LILRA2Q8N149 483 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 CA13Q8N1Q1 262 aa6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 TP53I13Q8NBR0 393 aaPredicted RBP6.34□□□□□ -1.39
SRGAP1-206ENST00000543397 SP7Q8TDD2 431 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms