RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 GPX5O75715 221 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 ZMPSTE24O75844 475 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 P04436 131 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 IFNW1P05000 195 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 ANXA5P08758 320 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 ADORA3P0DMS8 318 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 SNHG28P0DPA3 235 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 NR2C1P13056 603 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 HOXB2P14652 356 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 H2AFXP16104 143 aaPredicted RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 PGAM1P18669 254 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 KDELR2P33947 212 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 ID1P41134 155 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 RPL10AP62906 217 aaKnown RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 NTHL1P78549 312 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 MRPS25P82663 173 aaKnown RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 PITPNAQ00169 270 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 RBBP4Q09028 425 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 CNTN1Q12860 1018 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 MED21Q13503 144 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 SERTAD2Q14140 314 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 CTTNQ14247 550 aaKnown RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 SLC17A1Q14916 467 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 TRAM2Q15035 370 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 HAGHQ16775 308 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 DUOXA1Q1HG43 343 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 SLC25A52Q3SY17 297 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 FAM74A3Q4VXF1 159 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 SLC35D3Q5M8T2 416 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 SAMD4BQ5PRF9 694 aaKnown RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 C1orf220Q5T0J3 134 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 UTF1Q5T230 341 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 ASPHD1Q5U4P2 390 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 REEP3Q6NUK4 255 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 Q6ZSR3 168 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 LANCL3Q6ZV70 420 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 HPS6Q86YV9 775 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 CRLF3Q8IUI8 442 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 SLC35F2Q8IXU6 374 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 RNF113BQ8IZP6 322 aaKnown RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 LINC00518Q8N0U6 118 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 LIX1Q8N485 282 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 TMEM199Q8N511 208 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 C19orf18Q8NEA5 215 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 OR52I1Q8NGK6 324 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 OR2L8Q8NGY9 312 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 MPLKIPQ8TAP9 179 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 TCP10LQ8TDR4 215 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 TMEM255BQ8WV15 326 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 C18orf25Q96B23 403 aaPredicted RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 BIRC7Q96CA5 298 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 RNF170Q96K19 258 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 B3GALT6Q96L58 329 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 CNN2Q99439 309 aaKnown RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 HSD17B14Q9BPX1 270 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 MAPKAP1Q9BPZ7 522 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 ULBP2Q9BZM5 246 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 COMMD4Q9H0A8 199 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 NXF5Q9H1B4 397 aaKnown RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 CXXC4Q9H2H0 198 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 NXF3Q9H4D5 531 aaKnown RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 WDR55Q9H6Y2 383 aaPredicted RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 KIR3DX1Q9H7L2 352 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 NIPAL2Q9H841 368 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 MAP6D1Q9H9H5 199 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 POPDC2Q9HBU9 364 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 ANKHQ9HCJ1 492 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 SLC40A1Q9NP59 571 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 SIGLEC8Q9NYZ4 499 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 USE1Q9NZ43 259 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 MSRB1Q9NZV6 116 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 ZDHHC2Q9UIJ5 367 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 ZNF221Q9UK13 617 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 ZNF580Q9UK33 172 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 FBXL4Q9UKA2 621 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 NXT1Q9UKK6 140 aaKnown RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 RAB23Q9ULC3 237 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 HYOU1Q9Y4L1 999 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 TIMM22Q9Y584 194 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 TSSC4Q9Y5U2 329 aaPredicted RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 SAR1BQ9Y6B6 198 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 SHROOM3Q8TF72 1996 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 PLXNB2O15031 1838 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 COL5A1P20908 1838 aaPredicted RBP3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 LOC285556D6RIA3 1793 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 COL6A6A6NMZ7 2263 aa3.3□□□□□ -1.88
AC055720.1-201ENST00000539552 ATG2AQ2TAZ0 1938 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 CGNL1Q0VF96 1302 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 TRBV5-5A0A0J9YX44 114 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 LINC01548A6NM66 108 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 LRRN3E7EW58 273 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 LMO7DNF2Z398 122 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 F8VP50 259 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 BLOC1S5-TXNDC5H3BN57 136 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 J3QKU1 62 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 ZNF195O14628 629 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 MGST3O14880 152 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 DENRO43583 198 aaKnown RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 SYNGR3O43761 229 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 KIAA0513O60268 411 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms