RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 EXOSC4Q9NPD3 245 aaKnown RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 RBFOX1Q9NWB1 397 aaKnown RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 BOLA1Q9Y3E2 137 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 AUP1Q9Y679 476 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 FREM3P0C091 2139 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 IRGMA1A4Y4 181 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 PRODHO43272 600 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 CDC40O60508 579 aaKnown RBP eCLIP8.01□□□□□ -1.13
DDB1-213ENST00000539332 OR2J2O76002 312 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 SERPINA7P05543 415 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 CSF3P09919 207 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 FUT1P19526 365 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 PGCP20142 388 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 PTNP21246 168 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 SDC2P34741 201 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 PLA2G5P39877 138 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 PTGDSP41222 190 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 P2RX1P51575 399 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 FBXW4P57775 412 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 EGR4Q05215 589 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 CRYZQ08257 329 aaKnown RBP8.01□□□□□ -1.13
DDB1-213ENST00000539332 BAMBIQ13145 260 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 SRSF6Q13247 344 aaKnown RBP8.01□□□□□ -1.13
DDB1-213ENST00000539332 SSX1Q16384 188 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 TMEM44Q2T9K0 475 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 ZNF791Q3KP31 576 aaPredicted RBP8.01□□□□□ -1.13
DDB1-213ENST00000539332 SOWAHCQ53LP3 525 aaPredicted RBP8.01□□□□□ -1.13
DDB1-213ENST00000539332 Q5BKY6 102 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 DCAF10Q5QP82 559 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 AADACL4Q5VUY2 407 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 SMARCD3Q6STE5 483 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 PROKR2Q8NFJ6 384 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 SLC22A8Q8TCC7 542 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 GPR119Q8TDV5 335 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 SGTBQ96EQ0 304 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 TMEM80Q96HE8 168 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 ZNF582Q96NG8 517 aaPredicted RBP8.01□□□□□ -1.13
DDB1-213ENST00000539332 SLC38A2Q96QD8 506 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 RASL10BQ96S79 203 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 GPX7Q96SL4 187 aaPredicted RBP8.01□□□□□ -1.13
DDB1-213ENST00000539332 MMP28Q9H239 520 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 FN3KQ9H479 309 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 DNAJC27Q9NZQ0 273 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 EIF3KQ9UBQ5 218 aaKnown RBP8.01□□□□□ -1.13
DDB1-213ENST00000539332 BAIAP2Q9UQB8 552 aa8.01□□□□□ -1.13
DDB1-213ENST00000539332 RPL36Q9Y3U8 105 aaKnown RBP8.01□□□□□ -1.13
DDB1-213ENST00000539332 DSPP15924 2871 aaKnown RBP8□□□□□ -1.13
DDB1-213ENST00000539332 ANKUB1A6NFN9 424 aa8□□□□□ -1.13
DDB1-213ENST00000539332 ELOA3DA6NLF2 546 aaPredicted RBP8□□□□□ -1.13
DDB1-213ENST00000539332 SNTNA6NMZ2 147 aa8□□□□□ -1.13
DDB1-213ENST00000539332 C17orf51A8MQB3 221 aa8□□□□□ -1.13
DDB1-213ENST00000539332 FAM25EA8MYX2 175 aa8□□□□□ -1.13
DDB1-213ENST00000539332 MYL12BO14950 172 aa8□□□□□ -1.13
DDB1-213ENST00000539332 HCRTR2O43614 444 aa8□□□□□ -1.13
DDB1-213ENST00000539332 TLX2O43763 284 aaPredicted RBP8□□□□□ -1.13
DDB1-213ENST00000539332 NPIPB7O75200 414 aa8□□□□□ -1.13
DDB1-213ENST00000539332 ITGA10O75578 1167 aa8□□□□□ -1.13
DDB1-213ENST00000539332 OR7A10O76100 309 aa8□□□□□ -1.13
DDB1-213ENST00000539332 ADRA2AP08913 450 aa8□□□□□ -1.13
DDB1-213ENST00000539332 CTRB1P17538 263 aa8□□□□□ -1.13
DDB1-213ENST00000539332 MYL12AP19105 171 aa8□□□□□ -1.13
DDB1-213ENST00000539332 WT1P19544 449 aaPredicted RBP8□□□□□ -1.13
DDB1-213ENST00000539332 CFL1P23528 166 aaKnown RBP8□□□□□ -1.13
DDB1-213ENST00000539332 BTG1P62324 171 aa8□□□□□ -1.13
DDB1-213ENST00000539332 CHAF1BQ13112 559 aa8□□□□□ -1.13
DDB1-213ENST00000539332 RIN1Q13671 783 aa8□□□□□ -1.13
DDB1-213ENST00000539332 CBFBQ13951 182 aa8□□□□□ -1.13
DDB1-213ENST00000539332 SPHARQ15513 63 aa8□□□□□ -1.13
DDB1-213ENST00000539332 SNAPC1Q16533 368 aa8□□□□□ -1.13
DDB1-213ENST00000539332 TATDN3Q17R31 274 aa8□□□□□ -1.13
DDB1-213ENST00000539332 ELOA3BQ3SY89 546 aa8□□□□□ -1.13
DDB1-213ENST00000539332 PYDC2Q56P42 97 aa8□□□□□ -1.13
DDB1-213ENST00000539332 CTRB2Q6GPI1 263 aa8□□□□□ -1.13
DDB1-213ENST00000539332 LSRQ86X29 649 aaPredicted RBP8□□□□□ -1.13
DDB1-213ENST00000539332 LAX1Q8IWV1 398 aa8□□□□□ -1.13
DDB1-213ENST00000539332 SLC38A6Q8IZM9 456 aa8□□□□□ -1.13
DDB1-213ENST00000539332 ELOA3Q8NG57 546 aa8□□□□□ -1.13
DDB1-213ENST00000539332 OR52L1Q8NGH7 329 aa8□□□□□ -1.13
DDB1-213ENST00000539332 LRRC20Q8TCA0 184 aa8□□□□□ -1.13
DDB1-213ENST00000539332 CREB3L1Q96BA8 519 aa8□□□□□ -1.13
DDB1-213ENST00000539332 SPACA9Q96E40 222 aaPredicted RBP8□□□□□ -1.13
DDB1-213ENST00000539332 DIRAS2Q96HU8 199 aa8□□□□□ -1.13
DDB1-213ENST00000539332 MAP6Q96JE9 813 aa8□□□□□ -1.13
DDB1-213ENST00000539332 LRR1Q96L50 414 aa8□□□□□ -1.13
DDB1-213ENST00000539332 TEX12Q9BXU0 123 aa8□□□□□ -1.13
DDB1-213ENST00000539332 BARHL1Q9BZE3 327 aa8□□□□□ -1.13
DDB1-213ENST00000539332 ENKD1Q9H0I2 346 aa8□□□□□ -1.13
DDB1-213ENST00000539332 AMBNQ9NP70 447 aa8□□□□□ -1.13
DDB1-213ENST00000539332 FGF20Q9NP95 211 aaPredicted RBP8□□□□□ -1.13
DDB1-213ENST00000539332 ISYNA1Q9NPH2 558 aa8□□□□□ -1.13
DDB1-213ENST00000539332 TIGARQ9NQ88 270 aa8□□□□□ -1.13
DDB1-213ENST00000539332 CMC2Q9NRP2 79 aa8□□□□□ -1.13
DDB1-213ENST00000539332 SNTG1Q9NSN8 517 aa8□□□□□ -1.13
DDB1-213ENST00000539332 GLTPQ9NZD2 209 aa8□□□□□ -1.13
DDB1-213ENST00000539332 PFDN2Q9UHV9 154 aa8□□□□□ -1.13
DDB1-213ENST00000539332 ADAM30Q9UKF2 790 aa8□□□□□ -1.13
DDB1-213ENST00000539332 ING4Q9UNL4 249 aa8□□□□□ -1.13
DDB1-213ENST00000539332 LSM2Q9Y333 95 aaKnown RBP8□□□□□ -1.13
DDB1-213ENST00000539332 TRAV27A0A087WT01 109 aa7.99□□□□□ -1.13
DDB1-213ENST00000539332 A0A0X1KG70 313 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms