RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 NIPA1Q7RTP0 329 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 APTXQ7Z2E3 356 aaKnown RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ECHDC2Q86YB7 292 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 OR4K14Q8NGD5 310 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 SUN5Q8TC36 379 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 MCOLN3Q8TDD5 553 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 NAT6Q93015 286 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 RPUSD4Q96CM3 377 aaKnown RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 VSIG2Q96IQ7 327 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PANX1Q96RD7 426 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 RNF126Q9BV68 326 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 FAIM2Q9BWQ8 316 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PARD6GQ9BYG4 376 aaPredicted RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 OR11A1Q9GZK7 315 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 GFRA4Q9GZZ7 299 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 IQCGQ9H095 443 aaKnown RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 C20orf85Q9H1P6 137 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 VPS37BQ9H9H4 285 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 B3GAT2Q9NPZ5 323 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ANAPC11Q9NYG5 84 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ALMS1Q8TCU4 4167 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 SLIT2O94813 1529 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ARHGEF12Q9NZN5 1544 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PHLPP1O60346 1717 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PCM1Q15154 2024 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 MYO10Q9HD67 2058 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 A0A0J9YWU9 116 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 LOC105371267A0A1B0GV96 52 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 A8MU10 97 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 H3BMQ9 156 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 RAD51BO15315 384 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 POLR2DO15514 142 aaKnown RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 GMDSO60547 372 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 SERPINA3P01011 423 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 UGT2B4P06133 528 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 UQCRFS1P1P0C7P4 283 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 GSTT2P0CG29 244 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 GSTT2BP0CG30 244 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 OR8G3PP0DMU2 310 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 NPR2P20594 1047 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 CYP2B6P20813 491 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 SERPINA2P20848 420 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 FASP25445 335 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 BIDP55957 195 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 C21orf59P57076 290 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 SEC61GP60059 68 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 PLP1P60201 277 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 MYL6P60660 151 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 PLOD1Q02809 727 aaPredicted RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 UBE2V2Q15819 145 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 CHRNA6Q15825 494 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 GABRA6Q16445 453 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 PSG3Q16557 428 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM44Q2T9K0 475 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 COA6Q5JTJ3 125 aaKnown RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 ARMC12Q5T9G4 340 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 SYPL2Q5VXT5 272 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 TTC19Q6DKK2 380 aaPredicted RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 WDR82Q6UXN9 313 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 NPSR1Q6W5P4 371 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 HSDL2Q6YN16 418 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 CCDC80Q76M96 950 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 HPS6Q86YV9 775 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 PNKDQ8N490 385 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 ARIH2OSQ8N7S6 290 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 OR1L6Q8NGR2 347 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 MAGEE2Q8TD90 523 aaPredicted RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 CTNNBL1Q8WYA6 563 aaPredicted RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 ELMO1Q92556 727 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 ISG20Q96AZ6 181 aaKnown RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 ZBED6CLQ96FA7 236 aaPredicted RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 SLITRK2Q9H156 845 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 STMN4Q9H169 189 aaPredicted RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 RHBGQ9H310 441 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 PRSS16Q9NQE7 514 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 PRR34Q9NV39 138 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 MTCH1Q9NZJ7 389 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 SCML1Q9UN30 329 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 MRPS33Q9Y291 106 aaKnown RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 LTBP1Q14766 1721 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 ZFHX2Q9C0A1 2572 aaPredicted RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 CDK13Q14004 1512 aaKnown RBP0.78□□□□□ -2.29
HIF1A-204ENST00000539097 ZMYM4Q5VZL5 1548 aa0.78□□□□□ -2.29
HIF1A-204ENST00000539097 CACNA1SQ13698 1873 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 DENND4AQ7Z401 1863 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ADAMTSL1Q8N6G6 1762 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ATG2AQ2TAZ0 1938 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 DHX57Q6P158 1386 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 TRGV8A0A0C4DH27 118 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 IGHV3-35A0A0C4DH35 117 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 DHRS7CA6NNS2 312 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 PALM2-AKAP2B1ALY0 433 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NEDD8-MDP1E9PL57 170 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CNMDO75829 334 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CLPXO76031 633 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 HPP00738 406 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CST1P01037 141 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NPPAP01160 153 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 IGLV1-47P01700 117 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 KRTAP1-4P0C5Y4 121 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms