RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 C12orf10Q9HB07 376 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 ST6GALNAC2Q9UJ37 374 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 KCNG2Q9UJ96 466 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 RAD1O60671 282 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 HLA-DPB1P04440 258 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 OR2T7P0C7T2 308 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 DNASE1L1P49184 302 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 MYBPHQ13203 477 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 CLPPQ16740 277 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-205ENST00000538545 CEACAM19Q7Z692 300 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 GPAT4Q86UL3 456 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 CROCCP3Q8IVE0 287 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 OR4K17Q8NGC6 315 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 OR2T27Q8NH04 317 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 THEM6Q8WUY1 208 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 THAP4Q8WY91 577 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 NXPE2Q96DL1 559 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 OR5B2Q96R09 309 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 SDHCQ99643 169 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-205ENST00000538545 RNF32Q9H0A6 362 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 ISYNA1Q9NPH2 558 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 TMEM9BQ9NQ34 198 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 RHBDL2Q9NX52 303 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 GSTK1Q9Y2Q3 226 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 AKAP13Q12802 2813 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 XKRYO14609 159 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 SSX4O60224 188 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 DXOO77932 396 aaKnown RBP12.7□□□□□ -0.38
ACTN1-205ENST00000538545 MT-CO3P00414 261 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 ZNF806P0C7X5 589 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 LGALS3BPQ08380 585 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 ACSM1Q08AH1 577 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 TOMM20Q15388 145 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 STEAP3Q658P3 488 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 TIGD4Q8IY51 512 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 RDH10Q8IZV5 341 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 PPP1R14AQ96A00 147 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 ADAD1Q96M93 576 aaKnown RBP12.7□□□□□ -0.38
ACTN1-205ENST00000538545 STRADBQ9C0K7 418 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 PCDHGB2Q9Y5G2 931 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 GVINP1Q7Z2Y8 2422 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 A0A0B4J203 849 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 SULT1C4O75897 302 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 EDNRAP25101 427 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 PPP5CP53041 499 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 RPL27P61353 136 aaKnown RBP12.69□□□□□ -0.38
ACTN1-205ENST00000538545 TLE3Q04726 772 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 GGTLC2Q14390 218 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 TMEM176BQ3YBM2 270 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-205ENST00000538545 NDUFAF7Q7L592 441 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 MISPQ8IVT2 679 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 SUMF1Q8NBK3 374 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 ABHD4Q8TB40 342 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 RNF138Q8WVD3 245 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 RNF166Q96A37 237 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-205ENST00000538545 LOXL4Q96JB6 756 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 OR14A2Q96R54 314 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 TAAR9Q96RI9 348 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 TIGARQ9NQ88 270 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 FARSAQ9Y285 508 aaKnown RBP12.69□□□□□ -0.38
ACTN1-205ENST00000538545 TRBV2A0A0J9YWF9 115 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 IDH3BO43837 385 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 IL1AP01583 271 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 SLC2A2P11168 524 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-205ENST00000538545 NAGAP17050 411 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 FGF9P31371 208 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-205ENST00000538545 GDI2P50395 445 aaKnown RBP12.69□□□□□ -0.38
ACTN1-205ENST00000538545 PUDPQ08623 228 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 TGIF1Q15583 401 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 RGS21Q2M5E4 152 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 ARMC4Q5T2S8 1044 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 DMKNQ6E0U4 476 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-205ENST00000538545 ST8SIA1Q92185 356 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 B3GAT2Q9NPZ5 323 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 P4HTMQ9NXG6 502 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 IL17BQ9UHF5 180 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 IKZF2Q9UKS7 526 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 CLEC4AQ9UMR7 237 aa12.69□□□□□ -0.38
ACTN1-205ENST00000538545 IGHV3-15A0A0B4J1V0 119 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 PRSS37A4D1T9 235 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 PLPP2O43688 288 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 RGS9O75916 674 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-205ENST00000538545 TXNDC12O95881 172 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 PAHP00439 452 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 RENP00797 406 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 MT-ATP6P00846 226 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 RFC3P40938 356 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 SSR4P51571 173 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 PSPHP78330 225 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 ACSM3Q53FZ2 586 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 ATP1A1-AS1Q5TC04 95 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 CCDC190Q86UF4 302 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 SLC22A16Q86VW1 577 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 POMGNT2Q8NAT1 580 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 ZNF519Q8TB69 540 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 HPF1Q9NWY4 346 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 MRM2Q9UI43 246 aaKnown RBP12.68□□□□□ -0.38
ACTN1-205ENST00000538545 B9D1Q9UPM9 204 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 COA3Q9Y2R0 106 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-205ENST00000538545 PEX16Q9Y5Y5 336 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms