RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 CTRB2Q6GPI1 263 aa3.74□□□□□ -1.81
PRKDC-208ENST00000536710 ZNF836Q6ZNA1 936 aa3.74□□□□□ -1.81
PRKDC-208ENST00000536710 LHFPL3Q86UP9 236 aa3.74□□□□□ -1.81
PRKDC-208ENST00000536710 EID2Q8N6I1 236 aa3.74□□□□□ -1.81
PRKDC-208ENST00000536710 OR1N2Q8NGR9 330 aa3.74□□□□□ -1.81
PRKDC-208ENST00000536710 ACER1Q8TDN7 264 aa3.74□□□□□ -1.81
PRKDC-208ENST00000536710 KIFAP3Q92845 792 aa3.74□□□□□ -1.81
PRKDC-208ENST00000536710 ATP5SQ99766 215 aa3.74□□□□□ -1.81
PRKDC-208ENST00000536710 ANKRA2Q9H9E1 313 aa3.74□□□□□ -1.81
PRKDC-208ENST00000536710 NEK6Q9HC98 313 aa3.74□□□□□ -1.81
PRKDC-208ENST00000536710 CCL28Q9NRJ3 127 aa3.74□□□□□ -1.81
PRKDC-208ENST00000536710 A0A0G2JN53 185 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 TCP11X1B4DZS4 312 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 AIM2O14862 343 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 CLOCKO15516 846 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 OR2J3O76001 311 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 KRT14P02533 472 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 GKN3PP0CG01 181 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 UGT2B15P54855 530 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 WNT4P56705 351 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 YWHAGP61981 247 aaKnown RBP eCLIP3.73□□□□□ -1.81
PRKDC-208ENST00000536710 REG3AQ06141 175 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 DAZ2Q13117 558 aaKnown RBP3.73□□□□□ -1.81
PRKDC-208ENST00000536710 CENPQQ7L2Z9 268 aaPredicted RBP3.73□□□□□ -1.81
PRKDC-208ENST00000536710 ZADH2Q8N4Q0 377 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 MS4A15Q8N5U1 240 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 VN1R2Q8NFZ6 395 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 CXorf40AQ8TE69 158 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 PIBF1Q8WXW3 757 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 SGK3Q96BR1 496 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 DEFB127Q9H1M4 99 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 ASB8Q9H765 288 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 EML4Q9HC35 981 aaKnown RBP3.73□□□□□ -1.81
PRKDC-208ENST00000536710 ZNF160Q9HCG1 818 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 DAZ3Q9NR90 486 aaKnown RBP3.73□□□□□ -1.81
PRKDC-208ENST00000536710 MMP26Q9NRE1 261 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 RPS6KB2Q9UBS0 482 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 CELA1Q9UNI1 258 aa3.73□□□□□ -1.81
PRKDC-208ENST00000536710 LRRIQ3A6PVS8 624 aaPredicted RBP3.72□□□□□ -1.81
PRKDC-208ENST00000536710 TRIM49D1C9J1S8 452 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 DLGAP1O14490 977 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 RAB29O14966 203 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 TRAF3IP2O43734 574 aaPredicted RBP3.72□□□□□ -1.81
PRKDC-208ENST00000536710 MOSP00540 346 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 IGHV4-34P06331 123 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 CSF3P09919 207 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 ZNF43P17038 809 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 CCNCP24863 283 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 CTRLP40313 264 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 RORCP51449 518 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 ECH1Q13011 328 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 GPNMBQ14956 572 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 RFX4Q33E94 735 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 ZBED5Q49AG3 693 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 SPANXN2Q5MJ10 180 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 SASS6Q6UVJ0 657 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 ACP7Q6ZNF0 438 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 GTPBP8Q8N3Z3 284 aaPredicted RBP3.72□□□□□ -1.81
PRKDC-208ENST00000536710 LIX1Q8N485 282 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 FAM71E2Q8N5Q1 922 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 OR7G2Q8NG99 324 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 OR4F15Q8NGB8 312 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 OR1S2Q8NGQ3 325 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 RHEBL1Q8TAI7 183 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 ELMO1Q92556 727 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 SLC38A4Q969I6 547 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 MCUR1Q96AQ8 359 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 ZNF578Q96N58 590 aaPredicted RBP3.72□□□□□ -1.81
PRKDC-208ENST00000536710 CHP1Q99653 195 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 NXF3Q9H4D5 531 aaKnown RBP3.72□□□□□ -1.81
PRKDC-208ENST00000536710 SAMSN1Q9NSI8 373 aaKnown RBP3.72□□□□□ -1.81
PRKDC-208ENST00000536710 XCL2Q9UBD3 114 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 RABL2AQ9UBK7 228 aaPredicted RBP3.72□□□□□ -1.81
PRKDC-208ENST00000536710 NUFIP1Q9UHK0 495 aaKnown RBP3.72□□□□□ -1.81
PRKDC-208ENST00000536710 ZNF225Q9UK10 706 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 LSM7Q9UK45 103 aaKnown RBP3.72□□□□□ -1.81
PRKDC-208ENST00000536710 PACSIN2Q9UNF0 486 aaPredicted RBP3.72□□□□□ -1.81
PRKDC-208ENST00000536710 HEBP2Q9Y5Z4 205 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 NINLQ9Y2I6 1382 aa3.72□□□□□ -1.81
PRKDC-208ENST00000536710 PDS5BQ9NTI5 1447 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 ERVV-1B6SEH8 477 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 CDH16O75309 829 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 CLIC3O95833 236 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 KRTAP1-4P0C5Y4 121 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 EIF2S2P20042 333 aaKnown RBP3.71□□□□□ -1.82
PRKDC-208ENST00000536710 NUDT1P36639 197 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 TNNT2P45379 298 aaPredicted RBP3.71□□□□□ -1.82
PRKDC-208ENST00000536710 TFPI2P48307 235 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 CCNHP51946 323 aaPredicted RBP3.71□□□□□ -1.82
PRKDC-208ENST00000536710 RGS8P57771 180 aaPredicted RBP3.71□□□□□ -1.82
PRKDC-208ENST00000536710 GPX6P59796 221 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 ACTA2P62736 377 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 ACTG2P63267 376 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 ACTC1P68032 377 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 ACTA1P68133 377 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 FZD2Q14332 565 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 MRPL23Q16540 153 aaKnown RBP3.71□□□□□ -1.82
PRKDC-208ENST00000536710 ALKBH6Q3KRA9 238 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 CCDC148Q8NFR7 591 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 OR52K2Q8NGK3 314 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms